ggKbase home page

SCNpilot_expt_300_bf_scaffold_623_23

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(16105..17934)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003764590 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 609.0
  • Bit_score: 1113
  • Evalue 0.0
  • rbh
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 614.0
  • Bit_score: 910
  • Evalue 2.80e-262
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011 similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 614.0
  • Bit_score: 910
  • Evalue 1.40e-261

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1830
ATGCTGAAAACCATCGCCCCTGCCCGCCTCGAATTCAAGGACGGCGTCCCGTATTCCGCCGCCTACGGCGACATCTACCATTCCGCCGACGGCGGCGCCGGGCAGGCGCGCCATGTCTTTCTGCAGGGCTGCGGGCTGCCGCAGGCGTGGTCTCAGCGGAGCAATTTCGTCGTGCTGGAAACCGGCTTCGGCACCGGGCTGAATTTCCTGGCGACCTGGGCGGCCTGGCGAGACGACCCGGCGCGTCCCGCGCGGCTGCATTTCCTGTCGGTCGAGAAACACCCGTTCCGTACCGAAGACCTGGCGCGGCTGCATGCACAGTGGCCGGAATTCGCACCGCTCTCGGAAGAACTGCTGGCGAACTGGCCGACGCTGACGCCGGGTTTCCACCGCATCGCGCTCGACGACGGGCGCGTGCAGCTCACCCTGATGCTGGGCGACGCGCTCGATTGCCTGCCGCAGGTGCAGGCCGAGGTGGACGCGTTCTACCTGGATGGCTTCGCACCCGACTGCAACGCCGACCTGTGGCAGCCCGCGCTGTTCGACGCGTTGGTGCCGCTGGCCCGGCCGGGCGCGATGGCCGCGACCTATACCGTGGCGGCCTCGGTACGCGAGGGCCTAGGGCGGATCGGTTTCGTCTGCGAGAAGCGGGTGGGCTACGGCCGCAAGCGGCATTGCCTGCACGCACGTTTCCAGGAGGAAAGCCGCCGGGCCGACGCTGCGGTGCCGCGGCATGTCGCCGTCGTCGGCGCCGGTGTGGCAGGCGCTGCCGTGGCTCATGCGCTGGCACAGCGTGGCGTGGCGGTTACCGTGCTGGAGCGTGCCGGTTCACCGGCGCAGGCGGCTTCGGGCAATCCGGTGGCGGTGTTCCGGCCGGTGATCTCGCGCGACGACACCCTTGCGACGCGCCTGACGCGGGCGGCCTTCCTGCACGACCTGCGCGCATGGGCGATGCTGGAGGGCATCGAGTGGGCGCGCTGTGGCGTGCTGCATCTGGCCAAGAATGCGGAAGCGGCCGCGAAGCAGCGGCAGGCACTGGCGGCCACGATGCCGCCGACCGATTATGCGTATTGGGTGGAACAGGCGGCCGCACGCGAGCTGGCGAACTGGCCGGTGACAGCCCCCGGTGTGTATTACCCGGCAGCGGGCTGGGTGGTTCCGGGGAGCCTGTGCCGTGCCTGGCTCGGCCATCCGGCCATCCGTGTGCAGACGAACTGTGCCGTTGCGCGCGTGACGCGCGTTGCGGCGGGATGGCACGTCATGGATCGGGAAGGCACGGTACTGGCCGAGGCCGATGCCGTGGTGCTGGCAAACGCGCGCGACGCCCCGACACTGGTGCACGGGCAGCGCTGGCCGCTCAATACCGTGCGCGGGCAGATCACGCGCTTGCCGCCCGGCAGCCTGCCGGACATCCGGCGGGTGATTGCCCGTGAAGGCTATGTGACGCCGGGCACCCTGAAGGGCACAAGCGCACAACCGCTGGTCGGCGCTACGTACGAACACGATGACGACGACACGTCACCCCGCCTGGAAAGCGATCTCGCCAACCTGGCCCGGCTGGAGGCGATCCTGCCGGGCGTGGGCGAGCGTGTGGCCGTGGGGCAGGTGAGTGGCCGCGCCTCGTTGCGCGCTACCCTGCCGGATCGGCTGCCGCTGGTGGGCGCAGTCGACGGGCAGACCGGACTGTATGTCGCGGCGGGCTATGCCTCGCGCGGTGTCGTGTGGGCGGGGGTGCTGGGCGAGGCGCTGGCCGATCAGATGACCGGCCAGCCCTGGCCACTGGAAATCGAGTTGATGCGGGCGATCGCGCCCGGACGTTTCGAACGCTAG
PROTEIN sequence
Length: 610
MLKTIAPARLEFKDGVPYSAAYGDIYHSADGGAGQARHVFLQGCGLPQAWSQRSNFVVLETGFGTGLNFLATWAAWRDDPARPARLHFLSVEKHPFRTEDLARLHAQWPEFAPLSEELLANWPTLTPGFHRIALDDGRVQLTLMLGDALDCLPQVQAEVDAFYLDGFAPDCNADLWQPALFDALVPLARPGAMAATYTVAASVREGLGRIGFVCEKRVGYGRKRHCLHARFQEESRRADAAVPRHVAVVGAGVAGAAVAHALAQRGVAVTVLERAGSPAQAASGNPVAVFRPVISRDDTLATRLTRAAFLHDLRAWAMLEGIEWARCGVLHLAKNAEAAAKQRQALAATMPPTDYAYWVEQAAARELANWPVTAPGVYYPAAGWVVPGSLCRAWLGHPAIRVQTNCAVARVTRVAAGWHVMDREGTVLAEADAVVLANARDAPTLVHGQRWPLNTVRGQITRLPPGSLPDIRRVIAREGYVTPGTLKGTSAQPLVGATYEHDDDDTSPRLESDLANLARLEAILPGVGERVAVGQVSGRASLRATLPDRLPLVGAVDGQTGLYVAAGYASRGVVWAGVLGEALADQMTGQPWPLEIELMRAIAPGRFER*