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SCNpilot_expt_300_bf_scaffold_746_15

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 12009..13133

Top 3 Functional Annotations

Value Algorithm Source
extracellular repeat-containing protein, HAF family Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 356.0
  • Bit_score: 296
  • Evalue 5.90e-77
Extracellular repeat protein, HAF family id=4133802 bin=GWF2_Planctomycete_41_51 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 365.0
  • Bit_score: 259
  • Evalue 7.40e-66
extracellular repeat-containing protein, HAF family similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 258.0
  • Bit_score: 193
  • Evalue 8.30e-47

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Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCATACCCGCACCCCCCTGATAGCATCCGCCCTGCTTGCTGCATGCCTTATCTCAGGCGCGGCTCACGCAGCCCTGCCTTCCTATACGTTCACCGACCTTGGGACTTTGGGGGGAACGACCAGCGCTGCCCATGACATCAACGATGCAGGCCAGGTGGTGGGTGACGCCATGACATCCGGAAATTCTACCGGACACGCTTTCCTTTACAGCAACGGCACGATGATCGATCTAGGAACCCTTGGTGGACCAGGAAGTAGGGCGTTTGGCATCAACAACGCAGGTCAAGTGGTTGGCTTGGCGAGCCTCCGCACCCAGAACAGTGTTATCCGCCAACACGCTTTCCTTTACAGCAACGGCACGATGACCGACCTAGGAACCTTAGGGGGGCGATTTAGTTGGGCTAATGACATTAACAACGAGGGTCAAGCGGTAGGTTTAGCAACCCCTCTCGGCGACAAGCGTTCTCTCGCTGTCCGCTACGATAGCAGCGGGATACAGAACCTTGGATCCTTTGGGGGTGACGACAATAGTGCCACAAGCATCAACGACTCAGGTCAGGTGGTTGGGTGGTCGAGCACTTCCGGCAGCCTGATCCATCGCGCCTTCCTCTACACCAACGGCACAATGATCAATCTTGGAGCCTTAGGGGGGAATGGTAGCGATGCCTTAGACATTAACAACGCAGGTCAGGTTGTAGGTCGAGCCTACACTACCGGCAATGTTGCCCAGCACGCTTTTATATACAACAACGGCACGATTACTGATCTGAACAGCCTAATTGATCCTGAATCAGGGTGGGAACTACATTCTGCCGAAGCCATAAATAACCTAGGTCAGATCGTTGGTACTGGCACCATTGGTGGACAAAGCCGCGCCTTTGTTTACAGTAGCGGCATGATTACCGATCTGAACAGCCTAATAGATCCTGCATCAGGGTGGGTACTAGGCTCTGCAAGTGCTATTAATAATCAAGGTCAGATTGTTGGTACTGGCACCATTGGCGGACAAAGCCGCGCCTTCCTCATGACACCCGTCCCCGAGGCGCAGACCTACGCCATGATGCTGGCTGGTCTTGGGCTTGTTGGCTTTATAGCGCGACGCAGAAAACTAGCCAACGTCTGA
PROTEIN sequence
Length: 375
MHTRTPLIASALLAACLISGAAHAALPSYTFTDLGTLGGTTSAAHDINDAGQVVGDAMTSGNSTGHAFLYSNGTMIDLGTLGGPGSRAFGINNAGQVVGLASLRTQNSVIRQHAFLYSNGTMTDLGTLGGRFSWANDINNEGQAVGLATPLGDKRSLAVRYDSSGIQNLGSFGGDDNSATSINDSGQVVGWSSTSGSLIHRAFLYTNGTMINLGALGGNGSDALDINNAGQVVGRAYTTGNVAQHAFIYNNGTITDLNSLIDPESGWELHSAEAINNLGQIVGTGTIGGQSRAFVYSSGMITDLNSLIDPASGWVLGSASAINNQGQIVGTGTIGGQSRAFLMTPVPEAQTYAMMLAGLGLVGFIARRRKLANV*