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SCNpilot_expt_300_bf_scaffold_606_18

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38
Location: comp(16025..16540)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 171.0
  • Bit_score: 321
  • Evalue 4.30e-85
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 171.0
  • Bit_score: 321
  • Evalue 6.00e-85
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 177.0
  • Bit_score: 308
  • Evalue 1.10e-81

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGACGACAGCCGGTCGGCGCGTCCTGATCGGGCGCATCGTCGGGCTGTATGGCGTGCAGGGCTGGCTGAAGATCGAATCCTTCGCCGAGCCGCGCATGCGGATCTTCGATTACCAGCCGTGGCTGCTCGGTGCAGCGCCAGGCACGGAAAGAGAGGTCTCCGGCGTGAAAGGTCGACCGCAGGGCAAGGGCATGGTGGCCCAGTTGCCCGGGGTGGACGATCGGGACCAGGCGGCAGCGTTGATCGGTACCGACATCCATGTCGCCCGCGAACAGCTGCCTCCTCCGGCGAAGGGCGAGTATTACTGGGTCGACCTCGAAGGACTCGATGTCGTCACCGCGGACAACGTGGAGCTGGGGCGGGTCAGCCACCTGTTCGCCACCGGCGCCAACGATGTCGTGGTGGTCAGGGACGGTACGCGCGAGCGGCTGATCCCCTTTGTCCAGGGGTCGTATGTGCGTTCGGTGGACTTGTCCGCAGGGCGCATGGTGGTGGACTGGGATCCCGAATTCTGA
PROTEIN sequence
Length: 172
MTTAGRRVLIGRIVGLYGVQGWLKIESFAEPRMRIFDYQPWLLGAAPGTEREVSGVKGRPQGKGMVAQLPGVDDRDQAAALIGTDIHVAREQLPPPAKGEYYWVDLEGLDVVTADNVELGRVSHLFATGANDVVVVRDGTRERLIPFVQGSYVRSVDLSAGRMVVDWDPEF*