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SCNpilot_expt_300_bf_scaffold_681_18

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38
Location: comp(20950..22368)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CAA07 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 477.0
  • Bit_score: 642
  • Evalue 3.00e-181
  • rbh
Type I secretion protein TolC {ECO:0000313|EMBL:KJV26863.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 478.0
  • Bit_score: 517
  • Evalue 1.60e-143
type I secretion protein TolC similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 413.0
  • Bit_score: 471
  • Evalue 3.40e-130

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGCAATTGAAGCTGCTCACCCTGGCCCTGGCGCTGGCCGCCGTCTCGCTGCCCAGCCATGGCGAGGATCTGCTCGATGCCTATCGCGACGCGCGCGCCAATGACCCGGTACTGGCCCAGGCCGACGCGACGCGGCTGGCCACCGGCGAAGGCGTGCCGCAGGCGCGTGCCGGGCTGCTGCCGCAGATCGACGGTTCGCTCACCCTGCAACAGGCCAACGGCGGCCAGGGCAGCAACAGCCTGGACTTCGGTACCGGCGCCAACAGCTTCCTGTGCAGCGGCATCGCCGCCGGCAGCGGCAACTACACCTGTACCGGCCCGCTGGCGTCCAACGGCACCGCCTCCGACGGCGGCCACCTGCGCACGCGCAGCCTCAATGCCACGCTGACCCAGACCGTTTTCGACTTCAGCAAGTACGCCAACCTCAAGGCCGCGCACTCCGCCAAGGATGCGCAGGACGCGACCTACCAGGCCGCAGCGCAGGACCTGCTGGTGCGCGTCACCGCGGCGTACTTCACCGTGCTCAACGACGAGGATCAGCTGACCTTCGCCAAGGCCAACGAGGACGCGTTCAAGCGCCAGTACGACCAGGCCGACCAGCAGTACAAGGTGGGTCTGTCGGCGATCACCAACGTGTACCAGGCCAAGGCCTATTACGAGAACGCCAAGACCCAGACCATCGCGGCGCAGAACACGCTCGACAACGACCGCGAAGCCTTGCGCGTCATCACCGGCAAGCCGGTGGGCGAACTCAAGAAGCTGCGCGACGACCTGCCGATGGACGCGCCCGCGCCGAGCGATCCGCAGGCCTGGGTGAAGCAGGCGCTGGAGAACAACCCGACCTTGCAGGCGCAGCAGGACAACGTGCGGACCGCCGAGCACAACATCACCGCGGCACGCTCGGGCCACCTGCCCACGATCAGCGCCAGCGTGAACTACGGCAAGAGCAGCAGCTGGTACCAGGACCCCGCCCGCATCGGTTCGGAGCGGCCGGCCTCGACCACCATCGGGCTGACCCTGAACGTGCCGATCTTTTCCGGCGGTTACACCCAGTCGCGCGTGCGCCAGTCGATCTACCAGCGCGATGCCGCCAACGACGCACTGGAACTGCAGCGCCGCCAGGTGATCCAGAACACGCTCAACTACTACCGCTCGGTGCTCGCCGGCATTTCGCAGGTGGAGTCGGGCAAGGCCTCGGTGGAGTCCGGCCAGAAGGCGCTGGAAGCCACCCGTGCGGGCTTCGAGGTCGGCACGCAGACCTTCACCGACGTGCTGCTGGCGATCCAGACCCTGACCCAGTCCGAAAGCGCCTATTCGCAGGCGCGCCACCAGTTCATCCTGAACAAGCTGCTGTTGCAGCAGGCCGCCGGCACGGCCGACTTCAAGGACATTCAGGGCATCAACGCTCTGCTGCAGTGA
PROTEIN sequence
Length: 473
MQLKLLTLALALAAVSLPSHGEDLLDAYRDARANDPVLAQADATRLATGEGVPQARAGLLPQIDGSLTLQQANGGQGSNSLDFGTGANSFLCSGIAAGSGNYTCTGPLASNGTASDGGHLRTRSLNATLTQTVFDFSKYANLKAAHSAKDAQDATYQAAAQDLLVRVTAAYFTVLNDEDQLTFAKANEDAFKRQYDQADQQYKVGLSAITNVYQAKAYYENAKTQTIAAQNTLDNDREALRVITGKPVGELKKLRDDLPMDAPAPSDPQAWVKQALENNPTLQAQQDNVRTAEHNITAARSGHLPTISASVNYGKSSSWYQDPARIGSERPASTTIGLTLNVPIFSGGYTQSRVRQSIYQRDAANDALELQRRQVIQNTLNYYRSVLAGISQVESGKASVESGQKALEATRAGFEVGTQTFTDVLLAIQTLTQSESAYSQARHQFILNKLLLQQAAGTADFKDIQGINALLQ*