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SCNpilot_expt_300_bf_scaffold_536_20

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_67_13

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(18442..19188)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator id=5083630 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 177.0
  • Bit_score: 242
  • Evalue 3.70e-61
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 177.0
  • Bit_score: 242
  • Evalue 5.10e-61
DNA-binding transcriptional activator MhpR similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 258.0
  • Bit_score: 179
  • Evalue 1.10e-42

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGTATCTGCTTACGGAAAAACCCGAGGATTCGGCCTACAAGGAAGTCCGTGGACTGAGCCGGGGGCTGGCGGTATTGCGGGCACTGAACGGCATGCCGGGAGGCATGGGCGGCGTGGTCGAGCTGGCCCGGCTGACCGGCCTGCATCGCACGACCGTCAAGCGCCTGCTGGAAACCCTCAGGCAGGAAGGCCTGGTCCACCACCGGGTCGCCTCGCCCGCCATGGGCGCGCACCTCAGCGCCCTGTCCTGGCCCAGCGACCTCGCCACGCCCGACGGCGGCTTCATGATCGTGCGGGAATCGACGCACCGCGCCAGCCTGCTATCCCAGCACCGGGCCACCATCGGCACCCGCATCGCGATGCTGACCTCGGCCATCGGCCGTGCCTGGCTGGCCTATTGCTCGGACGAGGAACGGGAAGCGACCCTGTCGCTGCTGCGCGAACGCGGCGACGCCATCGGCGCCGTCGCCCGCGACAAGGCATATGTCGGACGCGTGCTGCGCGAGACCCGGCGGCGCGGCCATGCGGTCAACAAAGGAGAACTGGTGAACGAGGAAAGCGTCGCCGCGATCGCCTTCCCCATACGCCTGCGCGGCCATGCCATCGGCGCCATCAATCTCGTCCTGCAGCGCAACGTCGTCCCGGACCGGGAAATCTCGGCCCGCTACGTGCCGCTGCTGCGCATCCTGGCCGAAGAAATCTCAGTCGGCGCGACGCGGCTGTCCCAGCGCGGCGATCCGCCTTAA
PROTEIN sequence
Length: 249
MYLLTEKPEDSAYKEVRGLSRGLAVLRALNGMPGGMGGVVELARLTGLHRTTVKRLLETLRQEGLVHHRVASPAMGAHLSALSWPSDLATPDGGFMIVRESTHRASLLSQHRATIGTRIAMLTSAIGRAWLAYCSDEEREATLSLLRERGDAIGAVARDKAYVGRVLRETRRRGHAVNKGELVNEESVAAIAFPIRLRGHAIGAINLVLQRNVVPDREISARYVPLLRILAEEISVGATRLSQRGDPP*