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SCNpilot_expt_300_bf_scaffold_1003_7

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_67_13

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5606..5935

Top 3 Functional Annotations

Value Algorithm Source
Probable sigma(54) modulation protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KU96_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 111.0
  • Bit_score: 162
  • Evalue 2.80e-37
sigma(54) modulation protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 111.0
  • Bit_score: 162
  • Evalue 7.80e-38
Probable sigma(54) modulation protein {ECO:0000313|EMBL:CAJ50764.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 111.0
  • Bit_score: 162
  • Evalue 3.90e-37

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Taxonomy

Bordetella avium → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGAATCTGAGCATCAGCGGACATCACCTCATCGTGACCCCCGCCATACGTGAGTACGTCCTGAACAAGCTCACGCGGGTGTTGAGGCATTTCGATCACGTCATCGATATCCAGGTGCAGCTTTCCGTGGAAAAGCTGCGCCACAGCGCGGAAATCACCATGCATCTCCGAGGCAAGGACGTCCATTGCGAGGCCCAAGAAGAAAACCTATACGCCGCCATCGACGCCCTTGTCGACAAAGTCGACCGACAGGTCATCAAGTACAAGGACAAGGTCCAGCGACCTCGGGTCGAAGAAGCCATGAAGAGGGTGCCCCCCCCTTCGCCCTAA
PROTEIN sequence
Length: 110
MNLSISGHHLIVTPAIREYVLNKLTRVLRHFDHVIDIQVQLSVEKLRHSAEITMHLRGKDVHCEAQEENLYAAIDALVDKVDRQVIKYKDKVQRPRVEEAMKRVPPPSP*