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SCNpilot_expt_300_bf_scaffold_1297_6

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_67_13

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3955..4368)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase cytochrome B subunit n=39 Tax=Bordetella RepID=F4LF97_BORPC similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 137.0
  • Bit_score: 190
  • Evalue 1.20e-45
sdhC; succinate dehydrogenase cytochrome B subunit similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 137.0
  • Bit_score: 190
  • Evalue 3.40e-46
Succinate dehydrogenase cytochrome B subunit {ECO:0000313|EMBL:CAE42635.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="B similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 137.0
  • Bit_score: 190
  • Evalue 1.70e-45

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGTCCGACTCTGCCGCAAAACCCCGCCCACAGTTCAGAAATATCAATATCACCCAGCTCGCGGGATACCGCCTGCCACTGGCTGGCAAGGTGTCGATCCTGCACCGCGTTTCCGGCTTCGCGCTGTTCCTGGCGCTGCCGCTGGTGCTGCTGCCGCTGTTCGAACGCAGCCTGATTTCTGAGATCGGCTTCGCGCAGTTCCACGATTTCGTTGCACATCCCTTGGTCAAGATCGTCCTGCTGGGCCTGATCTGGGCATACCTGCATCACTTCTGTGCGGGCATCCGGTTCCTGGCGCTGGATCTGCACAAGGGACTGGAAAAGCACACCGCCCAGCGCACCGCGGGCACCGTGCTGGTCGTCAGCCTGGCGCTGACCGTCGTCTTCGGTTTGAAACTGTTCGGAGTATTCTGA
PROTEIN sequence
Length: 138
MSDSAAKPRPQFRNINITQLAGYRLPLAGKVSILHRVSGFALFLALPLVLLPLFERSLISEIGFAQFHDFVAHPLVKIVLLGLIWAYLHHFCAGIRFLALDLHKGLEKHTAQRTAGTVLVVSLALTVVFGLKLFGVF*