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SCNpilot_expt_300_bf_scaffold_2504_5

Organism: SCNPILOT_EXPT_300_BF_Devosia_62_6

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 5 ASCG 11 / 38
Location: 3328..4281

Top 3 Functional Annotations

Value Algorithm Source
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Rhizobium sp. AP16 RepID=J2LID4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 311.0
  • Bit_score: 336
  • Evalue 3.10e-89
  • rbh
reverse transcriptase similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 310.0
  • Bit_score: 343
  • Evalue 5.50e-92
Uncharacterized protein {ECO:0000313|EMBL:AHK03638.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 310.0
  • Bit_score: 343
  • Evalue 2.70e-91

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGCTCCTGCTGCGTCGTCGCGCTGGATATCACACTTCCAAGTCTTCAAAGCGCTCACTCGCTACGCCTATGTCGACGTCAAGAAAGCGTATGAGAGGCTCGGATATTTCGGTTTAAAGACGCGCCCTGACGGATCAAAGGTCGAAGGCTACCTCCGCGCGAAAAAGGACATCCCGAAGCAGCTATGCGATGGAAGGACGTTCCGAAGCAAGATCACCGGGGACGGCGCGGACCCATCTATTATTGTCGTCAACAAGACCGGGAAAGGCGTGCCGCAAGGGGCGCCGTTGTCAGACCTGCTGGCAAATCTATACATGGTCGAGTTCGACAAAGCGGTGTCCGATAGGATGGAATCGCTAGGTGGAACTTACATGCGCTATTCGGACGCCATTCTGCTTATCGCCCCTGTCAACGGCGCTGAGGGCGAGAAACTGGAAGAGTGGGTGCGAAAGTCGATCGCCACCTATGCCCCGGGCTTAGACATAAAAGAAGAAAAATCATCTCTGCACCTTGTCGAACCAGACGGGTCAGACCAGAGGGTTTCCGCCATCCTTCCATCGGGAAAACCAAACAAAAATCTTGAGTATTTGGGGTTCAAATACGATGGAAAGCATATTCTCATTCGCGACAAAACGATGAGTAGCCTGTACCGAAAAGTGGCAGCAAACTGCCGTGCGATCGCCCACAGCTTCGCCAAGCGGTATCAAGGCAAGTCGACGGCCGAGATCATGAGCATGGCCAATGTCGAAAAACTCATTCAAGCCTTTGGTCCTGTCAGAGATTTCGAGACGAAAAGTGACGACTACAGGAAGTGGACTTTTTCGACTTACGTAAAGCGCGCCAGTAAGGTCATGGGGCCTCTTGGCAACCCGATCAGTCGGCAAACTCGACGGCTACGCTCAGTTATCCGACAAAGGCTTGAGGCAGACTTGCTGGACATAGTTGGCCACTAG
PROTEIN sequence
Length: 318
MAPAASSRWISHFQVFKALTRYAYVDVKKAYERLGYFGLKTRPDGSKVEGYLRAKKDIPKQLCDGRTFRSKITGDGADPSIIVVNKTGKGVPQGAPLSDLLANLYMVEFDKAVSDRMESLGGTYMRYSDAILLIAPVNGAEGEKLEEWVRKSIATYAPGLDIKEEKSSLHLVEPDGSDQRVSAILPSGKPNKNLEYLGFKYDGKHILIRDKTMSSLYRKVAANCRAIAHSFAKRYQGKSTAEIMSMANVEKLIQAFGPVRDFETKSDDYRKWTFSTYVKRASKVMGPLGNPISRQTRRLRSVIRQRLEADLLDIVGH*