ggKbase home page

SCNpilot_expt_300_bf_scaffold_18_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(8435..8809)

Top 3 Functional Annotations

Value Algorithm Source
glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4) similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 74.0
  • Bit_score: 124
  • Evalue 2.00e-26
glutamate dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E1BCBF similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 75.0
  • Bit_score: 128
  • Evalue 5.00e-27
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 75.0
  • Bit_score: 129
  • Evalue 3.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCGCTGAAGAACGAACGCCGCGGCCGCCTGGCCGAACTGGCCGGCGACAAACGCTTCGAATTCCTCGAAGGCCGCCGCCCCTGGCACATCCCGGCCGACATCGCCCTGCCCTGCGCCACCCAGAACGAACTGGACGAAAGCGACGCCCGCACCCTCGTGCACAACGGCGCCCTGTGCGTGGCCGAAGGCGCCAACATGCCCTCCACCCTGGAAGTGGTGGACGAACGCCTGCACGTGATCTTGAAGGAGATCCACGTCAACTGCGTGCAGCATGGCAAGCAAGCCGATGGCAGCGTCAACTACGTCGATGGTGCGAATATCGCGGGGTTCGTGAAGGTGGCGGATGCAATGTTGGCGCAGGGGTTGTATTGA
PROTEIN sequence
Length: 125
MALKNERRGRLAELAGDKRFEFLEGRRPWHIPADIALPCATQNELDESDARTLVHNGALCVAEGANMPSTLEVVDERLHVILKEIHVNCVQHGKQADGSVNYVDGANIAGFVKVADAMLAQGLY*