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SCNpilot_expt_300_bf_scaffold_18_30

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(31888..33144)

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QFA6_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 415.0
  • Bit_score: 537
  • Evalue 1.60e-149
  • rbh
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 415.0
  • Bit_score: 537
  • Evalue 4.50e-150
Type II secretion system protein F {ECO:0000313|EMBL:KCV63162.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 415.0
  • Bit_score: 537
  • Evalue 2.20e-149

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGAACGTCTACTACTACCGCCTGCTGCTCTCCAGCGGCCGCGTGCGTGCCGGCGTCACCCAGCTGTCGGTCGAACACGATTCGTCGGCGCGGATGTGGCTGGAAAAGAACTTCGACGCGGTGGTGCTCACCCTGTACCGCTTCCCCGGCTGGCTGGCCGAGGCGCAGCGCACCGTCACCCAGCTGGTCAAGCCGAGCATCCGCTCGGTGGAACTGGCCGGCATGCTGCGCGACCTGGCGGTGATGACCTCCAGCGGCATCCCGATCATGGAATCGCTGCGCGCGGTCGCCAACGAAGTCGGCGGTGGCCGCACCTCCAACGCCGCCAGGCTGGCGCGCCGGCTGCTGGACGAGCTCGATGCCGGCGCCTCGCTCAGCGACGCGGTGTCGCGCTACCCGGACGCGTTCCCGGAAACCGTGCGCAACCTGCTGATGATCGGCGACGAGACCGGCACCATGGACAAGATGCTGATGGAGTCGGCCGACCACATCGAACGCATCTCCAAGATGACCGCCGACACCCGCCAGGCGCTGATCTACCCGGCATTCGTGTTCTCGGCGATCTTCGCCGCCGGCGGCTTCTGGATCTATTACGTCATCCCCAACCTGGCCGACCTGTTCAAGCAGATGAACGCCAAGCTGCCGCCGCTGACCATCGCGGTGATGAAGGGATCGGAATGGCTGATCGGCCACATCGGCTTCATCGCCGTGGCCATGGTGGTGGCGGCCTTCGTGCTGTGGGTGGCCTGGCGCTACAGCCGCGGCTTCCGCCGCGCCGCGCACTACACCCTGCACAAGCTGCCCATCGCCAGGACCATCATGTACTCCTCGGGGCTGGCGTTCTTCACCGAGTACATGGCGCTGCTGATCCGCGCCGGCGTGGACATGGTCAGCAGCCTGCAGGTGATGGAACGGGCGATGCGCGACGAGTACTACCGCGACCGCATCATCGCCATCCGCCAGGTGCTCGAGCGCGGCGACCGCGTGTCCGCGGCGATGCGCCAGGTCGGCGGCTTCCCTTCGATGATGGTGCGCATGATCGGCGTCGGCGAGGAGACCGGCACGCTCGATTCGCAGTTCGCACGCCTGTCGGCCGAGTACAGCCTGCGCCTGCAGCGCCTGATCACCAACCTTTCCGAAGTCATCAAGCCGGTGGTGGTGCTGCTGGCCGGCGGCATGTTCGTGTTCCTGATCGTCGCCCTGCTGCTGCCCGTCTACGACCTGGTCAAGCAGGCCATCGCTTCCCCGCAGTTCTGA
PROTEIN sequence
Length: 419
MNVYYYRLLLSSGRVRAGVTQLSVEHDSSARMWLEKNFDAVVLTLYRFPGWLAEAQRTVTQLVKPSIRSVELAGMLRDLAVMTSSGIPIMESLRAVANEVGGGRTSNAARLARRLLDELDAGASLSDAVSRYPDAFPETVRNLLMIGDETGTMDKMLMESADHIERISKMTADTRQALIYPAFVFSAIFAAGGFWIYYVIPNLADLFKQMNAKLPPLTIAVMKGSEWLIGHIGFIAVAMVVAAFVLWVAWRYSRGFRRAAHYTLHKLPIARTIMYSSGLAFFTEYMALLIRAGVDMVSSLQVMERAMRDEYYRDRIIAIRQVLERGDRVSAAMRQVGGFPSMMVRMIGVGEETGTLDSQFARLSAEYSLRLQRLITNLSEVIKPVVVLLAGGMFVFLIVALLLPVYDLVKQAIASPQF*