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SCNpilot_expt_300_bf_scaffold_2_15

Organism: SCNPILOT_EXPT_300_BF_Novosphingobium_63_58

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 19315..20220

Top 3 Functional Annotations

Value Algorithm Source
AraC-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7Y6_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 297.0
  • Bit_score: 423
  • Evalue 1.40e-115
AraC-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 297.0
  • Bit_score: 423
  • Evalue 4.00e-116
AraC-family transcriptional regulator {ECO:0000313|EMBL:BAI98605.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 297.0
  • Bit_score: 423
  • Evalue 2.00e-115

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGATCCCCTGAGCGAAATTATCACCCTGCTGCGCCCCCATGCGGCCCTGTCAAAGCCGATCACGGCGCGGGGGCGCTGGGCGGTTCGCTATCAGGCGCATGATGCGCCGGGCTTCACGCTCATACTCGCCGGACAGGCATGGGTGACCTTCGAAGGATCGGCGCCGCTGAGACTGGCGCAGGGGGATTTCCTGCTGATGCCGACAACGCCCGCCTTTGCTCTGGCCAGTGAGCCGGAACTGGCCGGTCCTCTGCTGGAGCCGAGCAAGGAGGCGGTCCGGCATGGGGAACAGGACGGCGAGCCTGATTTTGCGGCCCTAGGCGGCAGTTTTTCCTTTGAGCGGGCCAATGCCCCTCTCCTGCTCGCGCTGTTGCCCGGCCTGATCCACATTCCCGCTGCGCAGGGCATGATGGACCGCATGGGCCGGACCATCCACCTGCTGGCCGAAGAATGCACATCCAGTCATCCGGGCAAGGATCTGATCGTGCAACGCATGCTCGAAGTGCTGCTGGTCGAGGCCCTTCGGTGGCAAGGGGTGGGACATGATGCCGCCTCGGCAGGCTTGCTGGCCGGGCTGCGCGATCCGGCGCTGGCCCGGGCGCTGCACGCGATGCATGCCGATATCCGCGCCCATTGGACCGTTGCGCAGCTCGCAAGGATCGCCGGCATGTCGCGGTCGGCCTTTTCCGCGCGGTTCAGCCTGATCGTTGGCCGTGCGCCCATGGAATATCTCGCCAGTTGGCGCATGGCGGTTGCCAAGGATGCGCTTTCCCGTGGTGGCAAATCACTGGATCGCATCGCCGATGACATCGGTTATGAATCCGCCAGCGCTTTCAGCACCGCCTTTCGGAAACACAACGGCACTCCGCCGGGCAGCTTTGCCAGAATGATGGCAGAAGCGTAA
PROTEIN sequence
Length: 302
MDPLSEIITLLRPHAALSKPITARGRWAVRYQAHDAPGFTLILAGQAWVTFEGSAPLRLAQGDFLLMPTTPAFALASEPELAGPLLEPSKEAVRHGEQDGEPDFAALGGSFSFERANAPLLLALLPGLIHIPAAQGMMDRMGRTIHLLAEECTSSHPGKDLIVQRMLEVLLVEALRWQGVGHDAASAGLLAGLRDPALARALHAMHADIRAHWTVAQLARIAGMSRSAFSARFSLIVGRAPMEYLASWRMAVAKDALSRGGKSLDRIADDIGYESASAFSTAFRKHNGTPPGSFARMMAEA*