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SCNpilot_expt_300_bf_scaffold_2_28

Organism: SCNPILOT_EXPT_300_BF_Novosphingobium_63_58

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 35390..36316

Top 3 Functional Annotations

Value Algorithm Source
Dihydrodipicolinate synthetase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SDI2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 308.0
  • Bit_score: 468
  • Evalue 3.90e-129
  • rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:GAK69563.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 308.0
  • Bit_score: 487
  • Evalue 1.50e-134
dihydrodipicolinate synthetase similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 303.0
  • Bit_score: 426
  • Evalue 8.20e-117

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGCAAGTATCAAGCGTGATCGAGTGAACTGGCAGGGCTATCTTCCCGCCATCACAACTCCCTTTTCCGCCGATGGCGGGCTGGATGAGGCGGGTCTTGGCCGCCTGTTGGAATGGCTGCACGGCGAAGGCATGCATGGGCTGGTTCTGGCCGGAACCACAGGCGAATGGACCAGCATGAGCGCAGCCGAACGCGCCCGCCTGTTTGCCCTGACCGGCGCCCAGATGAAGGGCAAGCTGCCCCTGATCGCGGGCTGCTCCAGCTTTACCGCGACTGAGAGCATCGCCTTTGCCCGCCATGCGGCGCAGGCCGGATTTGACGGCGTGCTGTTGACGCCCCCGCCCTACATTCGCCCGCGCGCCGATGAAATCGTCGGCTTTTATGAAACGGTCAGCGCGGCCATCGACCTGCCCATCTGCATCTATAACTGGCCGCCGGGCACGGGCATCGACATGGATCTGCCCCTGCTCTCGCGCCTTGCCGACATCGAGGGCGTGGTGGCGATCAAGCAATCCTCCTCCTCTTTCGAGCGCTTTGTCGAGACCTTCTTTGCGCTCAAGGATCAGGTGCGCGTGTTCGGCTTTCCGATGAACGAGATCGGGCTGACGATGCTGCGCGTGCATGGCGGCGATGGCACGATGGGCGCGGGCGGTGTGCTGGGGCGCTATCAGCCGGGCTTTTACGATGCCTTCTGGGCGGGCGATCTGGAAGGTGCGCGCGCCTGCGGGGCCAAGGACCGCGTGCTGATGCGCGAATGGTACACGCCCGAACTGGTGGGGCGCTTCGGTTCCGGCCCGGCGATCCTCAAGGCCGCGCTCGATGCGCAGGGTCTGCCCGGCGGGCCGGTGCGCGCGCCTTTGCTGCCTATCACCGATGCCGCGCGCGAAGAGATTGCCCAAACGCTGCGAAAGCTGCAAATCCTGTGA
PROTEIN sequence
Length: 309
MASIKRDRVNWQGYLPAITTPFSADGGLDEAGLGRLLEWLHGEGMHGLVLAGTTGEWTSMSAAERARLFALTGAQMKGKLPLIAGCSSFTATESIAFARHAAQAGFDGVLLTPPPYIRPRADEIVGFYETVSAAIDLPICIYNWPPGTGIDMDLPLLSRLADIEGVVAIKQSSSSFERFVETFFALKDQVRVFGFPMNEIGLTMLRVHGGDGTMGAGGVLGRYQPGFYDAFWAGDLEGARACGAKDRVLMREWYTPELVGRFGSGPAILKAALDAQGLPGGPVRAPLLPITDAAREEIAQTLRKLQIL*