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SCNpilot_cont_300_bf_scaffold_28_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_47

near complete RP 52 / 55 MC: 5 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(5694..6548)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0R6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 282.0
  • Bit_score: 370
  • Evalue 1.30e-99
  • rbh
LysR family transcriptional regulator HdfR similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 281.0
  • Bit_score: 404
  • Evalue 2.30e-110
LysR family transcriptional regulator HdfR {ECO:0000313|EMBL:BAQ16592.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanib similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 281.0
  • Bit_score: 404
  • Evalue 1.20e-109

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Taxonomy

Methyloceanibacter caenitepidi → Methyloceanibacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGATGTCGAACTCGCCCGGACGTTTCTCGAAATCGTCGCCACGCGCAGCTTCGTTCGATCGGCCGAACATCTCAACGTGAGCCAGACGACAGTGAGCGCACGCATTCGTTCGCTCGAAGAACGGCTCGGCCGTCCGCTGTTTTTCCGCAACAAGAACGGGGCGACACTGACGCCGGCCGGCGAGCAGTTTTTGCGCTACGCACCGATGTTCGTGCAACTCTGGGAGCGAGCCCGGCATCAGGTCGCGGTGCCTTCCGGCAGCCGTGCCATTCTCGCCATCGGCGGCGAGCTCAGTCTGTGGCAGCCTTGGCTGCCGAACTGGCTGCGGTGGATGCGGCGGACGGCGCCTGATATCGCGTTGCGGGTCCAGGTCGGTTTGCCCGACGGCTTGAGCGGTCAGGTGGCCGATGGCGTGCTCGATATCGCTGTGATGTACGCTCCGCAACAGCGCCCCGGCTCGCGTGTCGAATTGTTACTCGAGGAAAAGCTGGTGTTGGTTTCGACCGATCCCAGCGCGCAACCGTCCAATCCGCCCGGTTATGTCTATGTCGATTGGGGCCAGGACTTTGCGTTGCATCACGGCCTGAGCTTCCCGGACGCGATGAATCCCGGCCTCGCCATCGGCCACGGGCCGCTGGCGCTCGACTTCATCCTTGAAGTCGGTGGCTCGGGCTATTTCCGTCAGCGTTCCATCGCGGCCCATCTGGCGAGCGGGAAGTTGCACCTGGTGCCGGGAGCGCCGAGCTTTTTCCATCCCATTTACGCCGTGTGCTCGTCGCAAGCGGACGAGGCGCTGATTGGATTGGCGCTGGAGGGCCTTCGCGCGGTCGCGGCGGCGGATCACAACGGGTAG
PROTEIN sequence
Length: 285
MDVELARTFLEIVATRSFVRSAEHLNVSQTTVSARIRSLEERLGRPLFFRNKNGATLTPAGEQFLRYAPMFVQLWERARHQVAVPSGSRAILAIGGELSLWQPWLPNWLRWMRRTAPDIALRVQVGLPDGLSGQVADGVLDIAVMYAPQQRPGSRVELLLEEKLVLVSTDPSAQPSNPPGYVYVDWGQDFALHHGLSFPDAMNPGLAIGHGPLALDFILEVGGSGYFRQRSIAAHLASGKLHLVPGAPSFFHPIYAVCSSQADEALIGLALEGLRAVAAADHNG*