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SCNpilot_cont_300_bf_scaffold_421_21

Organism: SCNPILOT_CONT_300_BF_Variovorax_67_131

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38 MC: 2
Location: 31193..32092

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V324_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 316.0
  • Bit_score: 541
  • Evalue 4.60e-151
  • rbh
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 316.0
  • Bit_score: 541
  • Evalue 1.30e-151
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU39163.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 316.0
  • Bit_score: 541
  • Evalue 6.40e-151

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGGCCTGTTCCTGCTGAAGCGCACGCTGACGCTGATCGGCACGCTGGTCGGCGCGTCGATCATCGTGTTTCTGGTGCTGGAGATTCTTCCGGGCAACGCGGCACAGATGCTGATGGGGCCGGATGCGTCGCCTGAAGCAGTCGCGGCGCTGGCGACCAAGCTCGGCCTCGACCTGCCGGCATGGACGCGCTACTGGCACTGGATCGGCGGCCTGCTGACCGGCAACCTGGGCGACAGCTACGCCTACAGCTCGCCGGTGCTCGACCTGATCCTGGAGCGCCTGGCACTCACCATGCCGCTCGCACTGCTGGCGATGTTCTTCACCACGGTGATCGCGCTGCTGGTGGGCGTGACCGCCGCCGCGCGCCACAACAAGCTGGGCGACGTCGGCCTGATGGGCATGGCCCAGGTCGGCATCGCCATTCCCAATTTCTGGTTCGCGATTCTTCTGATCCTCGTGTTCTCGGTGAAGCTGCAGTGGTTCTCCGCCGGCGGCTTCGAGGGCTGGGGCGACGGCTTCTTCTCGGGCGTCAAGTCGCTGTTGCTGCCCGCGCTTTCACTGGCGGTGGTACAGGCCGCGATCCTCGCGCGCATCACGCGCTCGGCCGTGCTGGAAGTGATGCGCGAAGACTTCGTGCGCACCGCGCGCGCCAAGGGCGTGTCGCAGCGCATGGTGCTGTGGACCCATGTGCTGCGCAACGCCATGATCCCCGTCATCACCGTCATGGGCATGCAGTTCTCCGAGCTGCTGGCCGGCACAATCGTGGTGGAGAACGTGTTCTATCTTCCCGGCCTCGGCCGGCTGATCTTCCAGGCCATCAGCAACCGCGACCTGATCGTGGTGCGCAACTGCGTGATGGCCGTCATCGACCCGCGCATCAAGGCCAGCGACATATGA
PROTEIN sequence
Length: 300
MGLFLLKRTLTLIGTLVGASIIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDLPAWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTAAARHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGVKSLLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVITVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMAVIDPRIKASDI*