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SCNpilot_cont_300_bf_scaffold_421_22

Organism: SCNPILOT_CONT_300_BF_Variovorax_67_131

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38 MC: 2
Location: 32089..32916

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component (Fragment) n=1 Tax=Variovorax sp. CF313 RepID=J2JHC8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 292.0
  • Bit_score: 495
  • Evalue 4.50e-137
  • rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL67330.1}; Flags: Precursor; Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 292.0
  • Bit_score: 495
  • Evalue 6.30e-137
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 294.0
  • Bit_score: 477
  • Evalue 2.10e-132

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAACGCCATCACGGCCCCGGCCCCCAGCGCCGCGGCGCTCAAGCTCCCCGGTTTCTGGCAACGCGCGGTGAAGCACCGCAGCTTCGTCATCGGCGGCGTGCTGGCCGCGCTGCTGCTCATCGCGGCACTCGTGTCTTTTGTCTGGACGCCGTGGTCGCCGTATGCGATGGACATGGCCAACAAGATGCAGGCGCCCACGGGCTCGCACTGGCTGGGCACCGATGCCTTCGGGCGCGACGTGGCCTCGCTGCTGCTGGTGGGCGCGCGGGCGTCCATCCTGGTAGGCATCATTGCCGTGGGCATCGGCCTGGTGGTCGGCACCGCGCTGGGCCTGCTCGCTGCCGCCAAGCGCGGCTGGGTCGAGGAAGCGGTCATGCGGCTGTCGGACTTCACGCTGGCCTTTCCCGCGATTCTCTCGGCCATCATGATGACCGCCGTGTTCGGCGCCGGCATCGTGAATGCCATCGTGGCCATCGGCATCTACAACATCCCGACCTTCGCGCGCATCACGCGCGCGTCGGCCAATGCCATCTGGTCGCGCGAGTACGTGCTGCCGAACATTTCGGCCGTGCTGATCGTGCAGATCACCATCCGCTTCGCCATCGCCATCCTCGCGGAGGCGGCGCTCTCCTACCTCGGCCTGGGCACGCAGCCGCCGCAGCCCTCATGGGGCCGCATGCTCAGCGAAGCGCAGACCCTGATGTTCCAGCAGCCACTGCTGGCGGTTTTCCCCGGCATGGCGATCGCGCTGGCGGTGCTCGGCCTGAACCTGCTGGGCGACGGCCTGCGCGACCTGCTCGATCCGCGCCTTGCCCGCGCACGCTGA
PROTEIN sequence
Length: 276
MNAITAPAPSAAALKLPGFWQRAVKHRSFVIGGVLAALLLIAALVSFVWTPWSPYAMDMANKMQAPTGSHWLGTDAFGRDVASLLLVGARASILVGIIAVGIGLVVGTALGLLAAAKRGWVEEAVMRLSDFTLAFPAILSAIMMTAVFGAGIVNAIVAIGIYNIPTFARITRASANAIWSREYVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTLMFQQPLLAVFPGMAIALAVLGLNLLGDGLRDLLDPRLARAR*