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SCNpilot_cont_300_bf_scaffold_586_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_19

near complete RP 50 / 55 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 11710..12549

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XK40_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 268.0
  • Bit_score: 215
  • Evalue 7.00e-53
transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 268.0
  • Bit_score: 215
  • Evalue 2.00e-53
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AGU53237.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 268.0
  • Bit_score: 215
  • Evalue 9.90e-53

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGGCCTCGTCGCCGATGAACCGCGCTCCGACATCGTCGGCGAATGACGCAAGCAGTCCCGCACCGTCGCAGGTCATCGACGAGCGTCTGTTCGTGGCCTCCGTCGGGAAGGCGATGAAGGTGCTGGAAGCTTTCGACAAGTCGGCCTCGACGCTCGGGCTTTCGGACATCGCGATCCGGACGGGGCTCGGCCGCAGCGCCTCGCAGCGCTTCATCTACACGCTGGAACGGCTGGGCTATCTCGACCGGGACGAGCAGACCAAGCGCTACAGCCTGTCCCGCAAGGTTTTTCGCTTCGCCCAGAATGCGGTTTCCGCCAATGCAGGGCTTGATGCCGCCTATCCGGCCATGCGTGAGCTCGCCGAGCGGACGCGCGAGACGATTTCCTGGGTCGAGGTCGACGGTGCGGAGATCGTGATCATCGCGACCGTCCCGAGCACCCATATCTCGTCGGTCAACCTGCCGGTGGGCACGCGCTTTCCGGCGCTTTCCTCGTCGTCGGGGCAGATGCTGCTGGCCCATTCGGCTCCCAGCCATGTCGAGAAGATCTGGGCGATTTCCCACCCATCGGTGGCACAGCGAACCAAAGCCGCGAACGCGGCCGAGATGGTCCGCATCCTGGAGGCCGCGAAGGCGACCGGCTTCGCCGTCACGGAGAAGAACATGGAGCAAGGCTCCATTTCGGTCTCCGCTCCGGTGCACGATCGGGCGGGGCGAGCGATCGGCGCGATCAACCTGTCGACGCTGACGACGCGCTACGATCGGGAGGCCGCGCTGCGCGACCTTGCCCCCCTCGTCGCCCAGGCAGCTCTCCGGACGACCGAGGCCTTGGTCTCCTAA
PROTEIN sequence
Length: 280
MASSPMNRAPTSSANDASSPAPSQVIDERLFVASVGKAMKVLEAFDKSASTLGLSDIAIRTGLGRSASQRFIYTLERLGYLDRDEQTKRYSLSRKVFRFAQNAVSANAGLDAAYPAMRELAERTRETISWVEVDGAEIVIIATVPSTHISSVNLPVGTRFPALSSSSGQMLLAHSAPSHVEKIWAISHPSVAQRTKAANAAEMVRILEAAKATGFAVTEKNMEQGSISVSAPVHDRAGRAIGAINLSTLTTRYDREAALRDLAPLVAQAALRTTEALVS*