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SCNpilot_cont_300_bf_scaffold_885

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_885_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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281..1711
DNA (1431bp) protein (477aa)
ATP-dependent RNA helicase RhlE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLT4_9PROT rbh
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:CCU63648.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso
DEAD/DEAH box helicase-like protein
SCNpilot_cont_300_bf_scaffold_885_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1766..2332
DNA (567bp) protein (189aa)
Cob(I)alamin adenosyltransferase PduO {ECO:0000313|EMBL:CCU63649.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CCU63649.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
Cob(I)alamin adenosyltransferase PduO n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL25_9PROT
ATP protein
SCNpilot_cont_300_bf_scaffold_885_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2343..2834)
DNA (492bp) protein (164aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWJ9_9PROT
SCNpilot_cont_300_bf_scaffold_885_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2868..5708)
DNA (2841bp) protein (947aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5N0_NITMU rbh
SCNpilot_cont_300_bf_scaffold_885_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5723..6709)
DNA (987bp) protein (329aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1288494 species="Bacteria; Proteobacte
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL52_9PROT rbh
riboflavin biosynthesis protein RibF
SCNpilot_cont_300_bf_scaffold_885_6
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7393..8601
DNA (1209bp) protein (403aa)
Integrase family protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DKN7_METS0 rbh
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADI30483.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera ve
SCNpilot_cont_300_bf_scaffold_885_7
unknown

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comp(8564..8731)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_885_8
unknown

Not on your lists

comp(8968..9120)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_885_9
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9865..12906
DNA (3042bp) protein (1014aa)
DEAD/DEAH box helicase n=1 Tax=Cupriavidus sp. WS RepID=UPI00036628B9 rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KHD21996.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia saccha
hsdR; Type I restriction-modification system endonuclease
SCNpilot_cont_300_bf_scaffold_885_10
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12910..14136
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002DA2D3E rbh
type I restriction modification DNA specificity domain protein
Uncharacterized protein {ECO:0000313|EMBL:KJV26000.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;
SCNpilot_cont_300_bf_scaffold_885_11
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14133..15215
DNA (1083bp) protein (361aa)
Anticodon nuclease n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UZG4_XANC8 rbh
Anticodon nuclease {ECO:0000313|EMBL:KHD21994.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;
anticodon nuclease
SCNpilot_cont_300_bf_scaffold_885_12
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15219..16832
DNA (1614bp) protein (538aa)
Type I site-specific deoxyribonuclease,methylase subunit n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P524_AROAE rbh
Type I restriction-modification protein subunit M {ECO:0000313|EMBL:KHD21993.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;"
hsdM; Type I site-specific deoxyribonuclease, methylase subunit
SCNpilot_cont_300_bf_scaffold_885_13
unknown

Not on your lists

17670..18329
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_885_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18457..18828
DNA (372bp) protein (124aa)
Prophage CP4-57 regulatory protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_cont_300_bf_scaffold_885_15
unknown

Not on your lists

18815..19255
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_885_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19257..22082
DNA (2826bp) protein (942aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00035D348B rbh
primase C 2 (PriCT-2) family Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_885_17
unknown

Not on your lists

22075..22581
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_885_18
unknown

Not on your lists

22572..22748
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_885_19
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22876..24546
DNA (1671bp) protein (557aa)
TPR repeat n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C676_9GAMM rbh
hypothetical protein Tax=RBG_16_Betaproteobacteria_56_24_curated
Sel1 domain-containing protein
SCNpilot_cont_300_bf_scaffold_885_20
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

25518..28517
DNA (3000bp) protein (1000aa)
DNA methyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6V4_SPHTD rbh
DNA methyltransferase
Tax=BJP_IG2158_Zixibacteria_48_33
Displaying 20 items

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