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SCNpilot_cont_300_bf_scaffold_819_20

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(18199..18762)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor RpoE negative regulatory protein RseA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIT8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 181
  • Evalue 9.90e-43
Sigma factor RpoE negative regulatory protein RseA {ECO:0000313|EMBL:CCU62388.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 181
  • Evalue 1.40e-42
anti sigma-E protein RseA similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 191.0
  • Bit_score: 163
  • Evalue 7.80e-38

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGAAGACAAGATTTCGGCGCTGATGGACGGGGAACTGGATGCGGCAGATGCGGCAAGCATGGTCGCCCAGTTCGGAAAAACAGATCGGTTTCGCGATGAATGGGCGATTTATCACATGATCAGCGATGTGATGGGCCAGTCGGGGCAAACCACAGGGCCAATGCCCGCCGACATCTCGCGGCGGGTCAGCACCAGGCTGGCGGGCGAGCCTACCGTCCTCGCGCCACGCTCTGTGGCTGTACCAAGGCAAAGGATGAAAACCTACGCCATTGCGGCCTCGATAACAGCCGCGGCGGTGGTTGGGTGGATGAACCTGCAGGTGGCCGAGCAGCCGGCCCAGCTCGTGGCGGATAATTCCCCCGCCGCCCCCGCTCCGGCCCAGACCCAGACCGTTGCCACCGCATTGCCACCGATTCCGGCCACTTACGTTTCAGCCTCGACCCCGGTCCATATCAACGACTACCTGCTGGCGCACCGGGCGTTTTCCCCCGGCACCGCCATGCCCGGAGCTGTACCCTACGTGCGAGCGGTTGCGGAATCGCGCGAACTATCCGCCAGATGA
PROTEIN sequence
Length: 188
MEDKISALMDGELDAADAASMVAQFGKTDRFRDEWAIYHMISDVMGQSGQTTGPMPADISRRVSTRLAGEPTVLAPRSVAVPRQRMKTYAIAASITAAAVVGWMNLQVAEQPAQLVADNSPAAPAPAQTQTVATALPPIPATYVSASTPVHINDYLLAHRAFSPGTAMPGAVPYVRAVAESRELSAR*