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SCNpilot_cont_300_bf_scaffold_819_21

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(18764..19366)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIG8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 200.0
  • Bit_score: 378
  • Evalue 4.50e-102
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 200.0
  • Bit_score: 378
  • Evalue 6.30e-102
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 200.0
  • Bit_score: 374
  • Evalue 2.40e-101

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGGTGACCGGGAAGTCGATCAGCAATTGGTGGAGCGCGCGCAACAGGGTGACAAACATGCGTTCGATCTGCTGGTGGTCAAATATCAGCGGAAACTCGCGCGATTGCTATCCCAGTTCATCCGCGATTCGACTGAAGTGGAAGACGTGACGCAGGAAGCCTTCGTCAAGGCTTATCGGGCTTTACCCTCGTTTCGCGGCGATAGCGCGTTTTATACCTGGCTTTACAGGATCGGGATCAACACAGCGAAAAACTTTCTGGTGGCACAGGGCCGCCGGGCGCCCACTACATCGGGCGGATTTGACAGCGAAGATGCGGAAGGCTTCGAAGAAGCCAGCAATCTTCGAGAAATGAATACACCGGAAAGTGAACTCACTAGCAAACAAATCGCTCAAACGGTAAACCAGACTCTGGAAGAACTGCCAGAAGAATTGCGTACAGCAATTACCTTGCGGGAAATCGAAGGACTGAGTTATGAGGAAATTGCGGGCATCATGAACTGTCCGATTGGCACCGTGCGATCGCGCATATTCCGCGCGCGCGAGGCCATAGCGGAAAAATTGCGTCCCCTGCTGGGGACTGGAAAAGATAAGAGGTGGTAA
PROTEIN sequence
Length: 201
MGDREVDQQLVERAQQGDKHAFDLLVVKYQRKLARLLSQFIRDSTEVEDVTQEAFVKAYRALPSFRGDSAFYTWLYRIGINTAKNFLVAQGRRAPTTSGGFDSEDAEGFEEASNLREMNTPESELTSKQIAQTVNQTLEELPEELRTAITLREIEGLSYEEIAGIMNCPIGTVRSRIFRAREAIAEKLRPLLGTGKDKRW*