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SCNpilot_cont_300_bf_scaffold_3696_2

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 505..927

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLZ8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 140.0
  • Bit_score: 264
  • Evalue 6.60e-68
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 140.0
  • Bit_score: 267
  • Evalue 1.10e-68
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 140.0
  • Bit_score: 263
  • Evalue 4.20e-68

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGCCGCTAGAATTGCATAAACAATCCGTGCCCTACAAGCCGAAAAAAGGCGAGAGCTACATGAACTCCAAGCAGCTTATGCACTTCCGCAATATTCTGGAAGGCATCAAGGTGGAGCTTGGCCATGATATCGATCGCACGGTACACACCATGCAGGACGAGGCCACCATATTCGCCGATCCCAATGATCGTGCAAGCCAGGAATCAGATATGGCGCTCGAATTACGCAACCGGGACCGGGAACGCAAGCTGATCAAGAAAATCGATGAAACGATTGCCAAGATCGATACAGGGGATTATGGATATTGCGAAAGCTGCGGCGTGGAGATTGGACTGAAGCGCCTGGAAGCGCGGCCGACCGCTACTCTTTGTATCGACTGCAAGACCCTGGATGAGATAAGGGAAAAACAGGTAGCAAAATAG
PROTEIN sequence
Length: 141
MPLELHKQSVPYKPKKGESYMNSKQLMHFRNILEGIKVELGHDIDRTVHTMQDEATIFADPNDRASQESDMALELRNRDRERKLIKKIDETIAKIDTGDYGYCESCGVEIGLKRLEARPTATLCIDCKTLDEIREKQVAK*