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SCNpilot_cont_300_bf_scaffold_1450

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1450_1
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1119)
-----------------
DNA (1119bp)
protein (373aa)
Plasmid replication protein RepA1 n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4P2_9XANT rbh
Probable RepA {ECO:0000313|EMBL:GAE52567.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv.
Putative replication protein RepA rbh
SCNpilot_cont_300_bf_scaffold_1450_2
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1224..1598)
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4T5_9XANT
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:GAE52566.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arb
SCNpilot_cont_300_bf_scaffold_1450_3
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1689..1997)
-----------------
DNA (309bp)
protein (103aa)
plasmid stabilization protein n=1 Tax=Marinobacter lipolyticus RepID=UPI00035FD32D
plasmid stabilization protein
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81904.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
SCNpilot_cont_300_bf_scaffold_1450_4
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2001..2825)
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae RepID=I3W0F9_PSESX
hypothetical protein
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81905.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
SCNpilot_cont_300_bf_scaffold_1450_5
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2822..3274)
-----------------
DNA (453bp)
protein (151aa)
Complete genome; segment 8/17 n=1 Tax=Photorhabdus luminescens subsp. laumondii (strain TT01) RepID=Q7N4G7_PHOLL
hypothetical protein
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81906.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
SCNpilot_cont_300_bf_scaffold_1450_6
Pseudomonas sp. CT14, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3570..4106)
-----------------
DNA (537bp)
protein (179aa)
Transposase TnpA2 n=22 Tax=Bacteria RepID=S0F1F6_KLEPN rbh
transposase
TnpA2 {ECO:0000313|EMBL:ABA25962.1}; TaxID=341029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CT14.;"
SCNpilot_cont_300_bf_scaffold_1450_7
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4118..4513)
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=19 Tax=Bacteria RepID=B3V716_ECOLX
putative nucleic-acid-binding protein, contains PIN domain
Putative uncharacterized protein {ECO:0000313|EMBL:ADU79010.1}; TaxID=654 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veronii.
SCNpilot_cont_300_bf_scaffold_1450_8
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4510..4761)
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00036F28C3
Regulators of stationary/sporulation gene expression
Transcriptional regulator {ECO:0000313|EMBL:KGK64920.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axon
SCNpilot_cont_300_bf_scaffold_1450_9
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4943..5509
-----------------
DNA (567bp)
protein (189aa)
DNA-invertase from lambdoid prophage e14 n=3 Tax=Proteobacteria RepID=M5D523_STEMA rbh
invertase
Invertase {ECO:0000313|EMBL:KFJ92663.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
SCNpilot_cont_300_bf_scaffold_1450_10
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5639..6217
-----------------
DNA (579bp)
protein (193aa)
Invertase recombinase-like protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4T1_9XANT rbh
Invertase recombinase-like protein {ECO:0000313|EMBL:CCC18701.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xantho
site-specific recombinase
SCNpilot_cont_300_bf_scaffold_1450_11
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6524..7756
-----------------
DNA (1233bp)
protein (411aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Cytosine-specific methyltransferase n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMQ9_9XANT rbh
cytosine methyltransferase
SCNpilot_cont_300_bf_scaffold_1450_12
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7756..8658
-----------------
DNA (903bp)
protein (301aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii (strain ATCC BAA-894) RepID=A7MRC6_CROS8 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEH52152.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1450_13
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8675..8866)
-----------------
DNA (192bp)
protein (64aa)
Plasmid-like protein n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8FU84_9XANT
Plasmid-like protein {ECO:0000313|EMBL:CEL42668.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv.
Plasmid-like protein
SCNpilot_cont_300_bf_scaffold_1450_14
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..9577)
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4T0_9XANT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAE52560.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arbor
SCNpilot_cont_300_bf_scaffold_1450_15
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9594..9809)
-----------------
DNA (216bp)
protein (72aa)
Plasmid partition protein ParB, truncated n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S9_9XANT
Plasmid partition protein ParB, truncated {ECO:0000313|EMBL:GAE52559.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source=
Putative plasmid partioning protein ParB
SCNpilot_cont_300_bf_scaffold_1450_16
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9822..10451)
-----------------
DNA (630bp)
protein (210aa)
Plasmid partitioning protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S8_9XANT rbh
Plasmid partitioning protein {ECO:0000313|EMBL:CCC18698.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
Putative plasmid partitioning protein
SCNpilot_cont_300_bf_scaffold_1450_17
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10610..12850)
-----------------
DNA (2241bp)
protein (747aa)
Relaxase/mobilization protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S7_9XANT rbh
hypothetical protein
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81912.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
Displaying 17 items

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