ggKbase home page

SCNpilot_cont_300_bf_scaffold_1106_4

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3379..5421)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase n=1 Tax=Rhizobium loti RepID=UPI00037275D3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 679.0
  • Bit_score: 1103
  • Evalue 0.0
  • rbh
Transglycosylase SLT domain protein {ECO:0000313|EMBL:AID29017.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 679.0
  • Bit_score: 1104
  • Evalue 0.0
soluble lytic murein transglycosylase precursor similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 679.0
  • Bit_score: 1099
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2043
ATGCCGACCGGGCGGCTTCTATTCATCGGTTTGCTGGGCGCCGTGGCCGCGTTGATGTCGGCCATGGTAACGAGCCGTGGCGTCGACATGCAGGCCACCTCGGCGATACCCGCGCCGGTGCTCGATGCCGGGAAGGACAAGGCAACCGATGCCCTGGCGCCGGCGGATGTCAGCCAGTTGAAGACCGGCCTGGATGCGCTTGCGGCCAACAATATCCCGGGTGCTCGAACGGTGCGCGATGCCCTGCCCGCCAACTCGCTCGACCAGCACATCCTGGCCTGGGCCGTCGCGCTTTATGGCGGCAGCAAGGTTCCAAGCGGCGAGATCGCGGACGCCGCCAAGATGCTGCCTGGCTGGCCGGGCACGCTCGCCTTGCGCCGCAACAGCGAGCGGGCGCTCTATCGCGAGAATCCGCCGCCCCAGAGTGTCGTCCAGGCGTTCAACGGCAGCCAGCCCTTGACCTTCGAAGGCGTCATGATCCTCGCTCGCGCCTATGTAGCGCTAGGTAACGTAAAAGCCGCCCAGTCGGTGCTGTCGCCGTTCTGGCGCACCGAGAAGCTGGAAGGCAAGGACGAAGCAGCGCTGATCCAGGAATTCGGCTCGCTCATTCCCGCGGCTGACCATCGCTATCGTATGGAGCGCATGTTCTACGCCGACCGGCCCGCATCGGCCTTGCGCGTCGCGGCGCTGGCCGGCGCCCAGCAGCTGGCGCAAGCCTGGGCAGCGGCCGAGAAGGGCGACAAGGGCGCACAAAAACTGCTGGACGCCGTGCCTTCGGGCCAGCGTTCCGCTGGATATCTCTTTGCCCAGGCTGAATATCTGCGCAAGCAAGGCAAGTTCGCCGATGCCGCCGCAGCGGTCATGAAGGCGCCGGGGGATCGCGACGCGCTGGTCGACCCGGACGCCTGGTGGGTCGAGCGCCGGGTGCTGTCGCGCGAATTGGTCGACCAGGGCGATATGAAGACCGCCTACCAGATCGTTGCCGCGCACGCGGCCGAGAGCGCGGCCAACACTGTCGATGCCGAATTCCACGCAGGCTGGTATGCCTTGCGCGGCCTCAACGATCCAAAACTCGCGGCAACGCATTTTGCCCGCATCGCCGACCTGGCGCAGGGGCCGATATCGCTGTCACGCGCCTACTATTGGCTCGGCCGTGCCGCTGAAGTGGGAGCGCCCGGCAGTGCGAAGGACTATTTCACCCGCGCCTCGGCCTATGGCACGACCTTCTATGGCCAGCTTGCTGCCGAGCGAATCGGCAGCAAGGCCCTGACCATCGTCTACCCGCAGCCCACGATAGAGGATCGGCGCAGTTTCGCCGCCCGTGAGGCCGTCAGTGCCATCAAGCGGCTGCAGGACGCCGGATACGACCGCTACGCCGATACGCTCTATCGCGATCTCGCCGGCCAGTTGACTCGCCCGGGCGAACTGGCGCTGCTGGCGGTGCTGGCCGAAAAGCAGGGCAATCATTTCATCGCGCTGAAGATCGGCAAGATCGCCGGGGCGCGCGGCATCGACGTCGGAGCGCTGTCGCACCCGCTGGGCGTCATTCCCGACAGCGCCGATATCTCGGGTTCGGGCAAGGCGCTGGCCTACGCAATCGCGCGCCAGGAAAGCGAATTCAATGTCGGCGCGGTATCGAGTGCCGGCGCGCGCGGACTTCTGCAATTGATGCCGGGAACCGCCAAGCAGCTCGCCAAGAAAGCCGGCATGACGTTCTCGCAGACGCGGCTGACCACCGATGCCGGGTACAACGCCACCCTCGGCGCCGCCTTCCTGGGAGAGCAGCTTGACCGCTTCAACGGATCCTACGTTCTGACCTTCGCCGGGTACAATGCCGGCCCCAACCGCGCGACCGAATGGGTTTCGCGCTATGGCGATCCGCGCGGCAAGGACGTTGACGAGGTGGTCGACTGGATCGAGCGGATTCCATACACGGAAACAAGAAGTTACGTGCAGCGCGTGATGGAGAATTACGAGGTCTACAAGATGCGTATTTCCGGACAGTACGACATCGTCGGCGACCTCGTGAACGGGCGGCGTTGA
PROTEIN sequence
Length: 681
MPTGRLLFIGLLGAVAALMSAMVTSRGVDMQATSAIPAPVLDAGKDKATDALAPADVSQLKTGLDALAANNIPGARTVRDALPANSLDQHILAWAVALYGGSKVPSGEIADAAKMLPGWPGTLALRRNSERALYRENPPPQSVVQAFNGSQPLTFEGVMILARAYVALGNVKAAQSVLSPFWRTEKLEGKDEAALIQEFGSLIPAADHRYRMERMFYADRPASALRVAALAGAQQLAQAWAAAEKGDKGAQKLLDAVPSGQRSAGYLFAQAEYLRKQGKFADAAAAVMKAPGDRDALVDPDAWWVERRVLSRELVDQGDMKTAYQIVAAHAAESAANTVDAEFHAGWYALRGLNDPKLAATHFARIADLAQGPISLSRAYYWLGRAAEVGAPGSAKDYFTRASAYGTTFYGQLAAERIGSKALTIVYPQPTIEDRRSFAAREAVSAIKRLQDAGYDRYADTLYRDLAGQLTRPGELALLAVLAEKQGNHFIALKIGKIAGARGIDVGALSHPLGVIPDSADISGSGKALAYAIARQESEFNVGAVSSAGARGLLQLMPGTAKQLAKKAGMTFSQTRLTTDAGYNATLGAAFLGEQLDRFNGSYVLTFAGYNAGPNRATEWVSRYGDPRGKDVDEVVDWIERIPYTETRSYVQRVMENYEVYKMRISGQYDIVGDLVNGRR*