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SCNpilot_cont_300_bf_scaffold_1173_16

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(19122..19706)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNC1_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 184.0
  • Bit_score: 328
  • Evalue 5.20e-87
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 184.0
  • Bit_score: 329
  • Evalue 8.60e-88
  • rbh
Regulatory protein TetR {ECO:0000313|EMBL:ADV11679.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 184.0
  • Bit_score: 329
  • Evalue 4.30e-87

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
TTGAGCCGGGAGGCCTGGATCGCCGCCGCGCGCAAGGTGCTGGAGAAGCGCGGCATCGGCGAGGTCAAGATCGACCATCTCGCCCTTCAGCTAAAGGTCACGCGCGGCAGTTTCTATTTCCACTTCACCAGCCTGGCCGATCTTCGCAACAGCCTTCTGGAGGAATGGCGGACCAGCAATTGCGCGCCATTCTGGGCCATGCGCGGCACCGAGACCGTCGACGGCCTCCAGTTCTTCACCGACATCGTCCACGCCTGGGTCAACGAGGACCCGTTCAGCCCGCTGCTCGACCTTGCGGTGCGCAACTGGTCGCGCACGTCGAAGAAGCTCGCCCAGGAAGTCAAGGAGATGGACGACCTGCGTATCGATCTCCTGGTGCGGGCGTTCCGCGCCATGGGCTATCCGGAAGACCAGAGCATCGTGCGCGCCCGCATCACCTATTTCCACCAGATCGGCCAGTACGCGCTCTCCTTCAAGGAGGACCCGGCCGTGCGCCGGCACTACCAGCCGCTGTTCGGCGAGGTGCTTCTCGGACCGTTGGTCCAGGAGCCGGACCTGCCCACGAGAGCGGCCGCCGGCGCCTGA
PROTEIN sequence
Length: 195
LSREAWIAAARKVLEKRGIGEVKIDHLALQLKVTRGSFYFHFTSLADLRNSLLEEWRTSNCAPFWAMRGTETVDGLQFFTDIVHAWVNEDPFSPLLDLAVRNWSRTSKKLAQEVKEMDDLRIDLLVRAFRAMGYPEDQSIVRARITYFHQIGQYALSFKEDPAVRRHYQPLFGEVLLGPLVQEPDLPTRAAAGA*