ggKbase home page

SCNpilot_cont_300_bf_scaffold_1546_7

Organism: SCNPILOT_CONT_300_BF_Cellulomonas_73_7

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 14 / 38
Location: 5170..6411

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXX1_KRIFD similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 411.0
  • Bit_score: 513
  • Evalue 1.80e-142
  • rbh
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 411.0
  • Bit_score: 513
  • Evalue 5.20e-143
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB33577.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribb similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 411.0
  • Bit_score: 513
  • Evalue 2.60e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGTGGAGGCGACGCGCGTCGAGGACCTGCTGCGCGAGCTGGCGCCGCAGGTGCTCGGCGTGCTCGTGCGCCGCTACGGCCGGTTCGACGCGTGCGAGGACGCCGTGCAGGACGCCCTGCTCGCAGCGGCCGGGCAGTGGCTCCGCGACGGTGTGCCGGACCACCCGCGCGCCTGGCTGGTGACGGTGGCCGCGCGAAGAGTCGTCGACGAGGTCCGGTCCGACGCCGCCCGTCGACGGCGGGAGCAGACCGCGGCGGCGCTCGCCGGGCTGCACCCGGACGCACCGGCTCCGGAGCTGCCCTGCGAGGAGGACGACAGCCTGACGCTGCTGTTCCTGTGCTGTCATCCGGCGGTGACGCCGGCCTCGCAGGTGGCGCTGACGCTGCGGGCCGTGGGCGGCCTCACCACCGCGGAGATCGCGGCGGCGTTCCTGGTGCCCGAGGCGACGATGGGCGCCCGGATCAGCCGTGCGAAGCGCCAGATCCGCGCGGCGGGCGCCACGTTCGCGCTGCCGCCGGTGCCCGAGCGGTCGGAGCGGCTGACCGTGGTGCTCCAGGTGCTCTACCTCGTCTTCAACGAGGGGTACGCGGCCACGTCCGGCGAGCGGTTGGTGCGTCCCGACCTCGCGGCCGAGGCGATCCGGCTGACCCGGATGCTGCACCGGCTGCTCCCCGACGACGGGGAGGTGGCCGGTCTGCTGGCGCTGATGCTGCTGACCGACGCCCGGCGCGAGGCGCGCACCACCGCGGCCGGCGACCTGGTGCCGCTCGGCGAGCAGGACCGCGGCCGGTGGGACGCGCAGCTGGTCGCCGAGGGAAGCGCCCTGGTCAGCAGCGCGCTGGCGCAGCCGGGCGTGGGTCCGTACCGCCTGCAGGCGGCGATCGCGGCGCTCCACGACGAGGCGGTCGGCACCTCGAGCACAGACTGGGAGCAGATCGCCGCGCTCTACGCCGTGCTCGAGCGTGTGGCACCGAACCCGGTGGTCAGCCTCAACCGTGCCGTCGCCGTCGCGATGACGGACGGCCCCGCCGCCGGCCTCGCCCTCCTCGAACCGCTCGACGAGGGCCCGCTGGCGGCGCAGCACCGCCTGCCCGCCGTCCGCGCACACCTGCTCGAGCTCGCCGGTGACCTGTCCGCGGCCCGGGCCCAGTACGTGCTCGCCGCCCAGCGCACCGCGAGCGCGCCGGAACGCCGGTACCTGCTCGGCCGGGCGGACGCCCTCGCAGCGTCGGGAGCGTGA
PROTEIN sequence
Length: 414
MVEATRVEDLLRELAPQVLGVLVRRYGRFDACEDAVQDALLAAAGQWLRDGVPDHPRAWLVTVAARRVVDEVRSDAARRRREQTAAALAGLHPDAPAPELPCEEDDSLTLLFLCCHPAVTPASQVALTLRAVGGLTTAEIAAAFLVPEATMGARISRAKRQIRAAGATFALPPVPERSERLTVVLQVLYLVFNEGYAATSGERLVRPDLAAEAIRLTRMLHRLLPDDGEVAGLLALMLLTDARREARTTAAGDLVPLGEQDRGRWDAQLVAEGSALVSSALAQPGVGPYRLQAAIAALHDEAVGTSSTDWEQIAALYAVLERVAPNPVVSLNRAVAVAMTDGPAAGLALLEPLDEGPLAAQHRLPAVRAHLLELAGDLSAARAQYVLAAQRTASAPERRYLLGRADALAASGA*