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SCNpilot_cont_300_bf_scaffold_1_12

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 25824..26393

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C8B8A similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 188.0
  • Bit_score: 316
  • Evalue 2.00e-83
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 160.0
  • Bit_score: 137
  • Evalue 3.60e-30
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB40403.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 160.0
  • Bit_score: 137
  • Evalue 1.80e-29

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGAAATCGAATCAATTTTCTTCCCTTTTTGCAAGGTCAGAAGGCGCTAATACGCTAGCCTTAAGCTCATTTGATGATATTTATCTGCAATACATAGAAAAGGTATATCAGAAATGCTTAACAATGACCAATAACCCTATAACCGCGCAAGACTATACGCAGGACATTTTTATTAAGGTATTTCTAAAATTAGATAGCTTTAAGCAACGATCCGATATATATACCTGGCTTTATTCTATTACGCATAATTACTGTGTCGATCAACTGCGAATGGAGAAGCGAAAAAAGCACCAACTCTTTGCACTTGAAGGCGGAATGGATTACAGTGAAGGGGAAAGCAGTACACTAGATGATAAACTAACAATTTTAGATCAACTGATCGATAACCTGCCCGAATCGGACCAACAGATGTTACGGTTACATTATCAGCAAGGTGTTAGGCTTGAGGCAATCGCCCGTCAAATGAACCTGAAGTTGAGTGCCGTTAAGATGCGACTATTGCGAAATCGTAGAGCCATTTACAAGAAATACCAACAGGTTGTCGGTAACATGGATTACGTTGACCAGTAA
PROTEIN sequence
Length: 190
MKSNQFSSLFARSEGANTLALSSFDDIYLQYIEKVYQKCLTMTNNPITAQDYTQDIFIKVFLKLDSFKQRSDIYTWLYSITHNYCVDQLRMEKRKKHQLFALEGGMDYSEGESSTLDDKLTILDQLIDNLPESDQQMLRLHYQQGVRLEAIARQMNLKLSAVKMRLLRNRRAIYKKYQQVVGNMDYVDQ*