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SCNpilot_cont_300_bf_scaffold_397_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(15670..17274)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5J0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 533.0
  • Bit_score: 966
  • Evalue 1.00e-278
  • rbh
rtcR; sigma54-dependent transcriptional activator RtcR similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 534.0
  • Bit_score: 966
  • Evalue 3.80e-279
  • rbh
Sigma54-dependent transcriptional activator RtcR {ECO:0000313|EMBL:AIC30517.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 534.0
  • Bit_score: 966
  • Evalue 1.90e-278

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
GTGAAGCGACGCGTAGCCATCAGCATATTGGGAACGACCCTCGATGCGGGGAAATGGGACAATCGCTGGAGCCGTTGGCGCCCTACCGTCGCGCTTTGCCAGCAATCCGGGCTCTTCGTCGATCGGCTGGAACTGATCCACGACAATCACGCACAGGCTCTCAGCGATCGGATCATCGGCGATATAGGAACGGTTTCGCCGGCGACCGAGGTGCGCAGCAATGTCATCAACTTTCGCGACCCCTGGGATTTCTCGGAAGTCTATACGAGCCTTAGAGACTTTGCGCGCCGCTACAGCTTTGACCCCGACGTCGAAGATTACCTCGTCAATATCACGACCGGCACCCACGTAGCACAGATCTGTTGGTTCCTGCTGACGGAGGCGCGCATCATTCCGGGCCGACTGTTGCAACTCTCGCCGCCGCGCGACAGGGAGGGCGAACAAGACTTCGCCGGCACTCACCGCATTATCGATCTGGATCTTTCGCGCTATGACGAGATCGCCAAGCGCTTTGCCTCCGAACGGGAAGACGCGGCTTCCTTCTTGAAATCAGGCATATCGACCCGTAACGGGGCTTTCAACCGGATGATCGACGAGATCGAAAGAGTGGTGATCAGATCGACTGCACCGGTCCTCCTGACGGGGCCAACAGGTGCCGGCAAGTCGCAGCTTGCCCGCCGGATCTACGAGTTGAAGAAGACCCAACGGAAGGTCAGCGGACCTTTCGTCGAAGTCAACTGTGCGACATTGCGTGGCGACCAGGCCATGTCCACGCTGTTCGGTCATGTGAAGGGGGCGTTTACCGGCGCGGCTGGTGAGCGTGCAGGCCTTCTCAAATCCGCCGACAAGGGCGTGCTGTTCCTCGACGAAATTGGCGAACTCGGCCTCGATGAGCAGGCCATGTGTCTGCGCGCGATCGAGGAAAAGAGATTCTTACCCGTCGGCGCCGACCGGGAGGTGTCAGCGCAATTCCAGCTGCTTGCAGGCACCAACCGCGATCTCGGCGAGGATGTCCGCAACGGACGGTTCCGCGAAGACCTCTACGCCCGGCTCAATCTCTGGACCTTCCAGCTACCGGCCTTACGTGAACGCAGGGAAGACATAGAACCCAACCTCGACTTCGAACTCAGACGCTACTTGGAGCGGGAAGGCGAGAACGTTACCTTCAACAAGGAAGCGCGTGAACGGTATCTTTCCTTCGCAACCGGTTCACAAGCCGTCTGGAGCGCCAATTTCCGTGATTTGTCGGCCTCGGTGACGCGCATGGCGACACTCGCGCCGCATGGGCGCATTACGAGCGATGTCGTTGACGACGAAATTGAGCGGCTAAATGCGCTTTGGCGTCGCTCGAATGATGACGCTGGACCGGATCTGATCCTTGAAGACGTGCTGGGTGCAGAGGCTGCCGATCGCCTCGATCGCTTTGACGCGGCACAGCTTGCAGCCGTCCTTCACATCTGCCGCGAACATGCGACGGCGAGTTCTGCCGGCAGAGCTCTGTTCGCAATCTCGCGATTGGAAAAGAAAAGCAGCAATGACGCAGATCGCCTGACGAAATATCTTGCGCGCTTCGGCGTCAGATTTGAGGACCTGAAACAACCGTGA
PROTEIN sequence
Length: 535
VKRRVAISILGTTLDAGKWDNRWSRWRPTVALCQQSGLFVDRLELIHDNHAQALSDRIIGDIGTVSPATEVRSNVINFRDPWDFSEVYTSLRDFARRYSFDPDVEDYLVNITTGTHVAQICWFLLTEARIIPGRLLQLSPPRDREGEQDFAGTHRIIDLDLSRYDEIAKRFASEREDAASFLKSGISTRNGAFNRMIDEIERVVIRSTAPVLLTGPTGAGKSQLARRIYELKKTQRKVSGPFVEVNCATLRGDQAMSTLFGHVKGAFTGAAGERAGLLKSADKGVLFLDEIGELGLDEQAMCLRAIEEKRFLPVGADREVSAQFQLLAGTNRDLGEDVRNGRFREDLYARLNLWTFQLPALRERREDIEPNLDFELRRYLEREGENVTFNKEARERYLSFATGSQAVWSANFRDLSASVTRMATLAPHGRITSDVVDDEIERLNALWRRSNDDAGPDLILEDVLGAEAADRLDRFDAAQLAAVLHICREHATASSAGRALFAISRLEKKSSNDADRLTKYLARFGVRFEDLKQP*