ggKbase home page

SCNpilot_cont_300_bf_scaffold_397_19

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 19580..20986

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 467.0
  • Bit_score: 916
  • Evalue 1.20e-263
RNA-splicing ligase RtcB n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VZ81_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 467.0
  • Bit_score: 916
  • Evalue 8.20e-264
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 467.0
  • Bit_score: 911
  • Evalue 1.30e-262
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGAGCGGACAGGATTTGATCGACGCCGGCATGAGCCAGGGAAAGTGGTTTCGCCCGGCTCTTGATGCGGCCAATGCGATTCTGAGCAAGGGTGGCTCGATGGCGGATGCGCTGGAAGCGGCAAAGGCCTTCCAGCCCGGACCAACGCTCGCCTTGAGGGCCGACAACGACATCGAGATCTATTCGAATATCCGCGCCGAAAACGCCTTCGAGCAGGACAATGTCGAGAAGGTCAACGCGACGATGCGGGCGCTGGTGCGCACGCCGGTCGTCCGTTCCGCGGCGATCATGCCGGACGCCTGCCCGGCAGGCCCGATCGGCACGATCCCGGTTGGCGGCGTGGTCGCTTCCGAAGCGATCCATCCCGGCATGCATTCGGCCGATATCTGCTGCTCGATGGCAATCTCGATCTTTCCGGGCGTCGATCCGAAAGCGCTGCTGGATGCCGTACACTCCGTGACGCATTTTGGTCCGGGCGGCCGCCCACGCGGCGCGCAGATCAAGCCTTCCGAGGCGACGCTATCGGCTTTCGAGCAGAACCCCTATCTGCGCGACGGAGCGCTGAGTGTCGGCATCGAACACTTCGCGACCCAGGGCGACGGCAATCATTTCGCCTATGTCGGAACCATGAAGTCGACCGGCGAAACGGCGCTCGTCACCCATCATGGATCGCGAGCTCCCGGTGCGCGGCTCTATGACAAGGGCATGAAGGTCGCCAATCGTTTCCGCGAGCAGATCTCGCCAGAGACCCATCGTGAGAACGCCTGGATTCCGGCGGACACCGAGGAAGGCGACCTCTACTGGTCGGCCCTGCAGACAATCCGCCGGTGGACGAAGGAAAACCACTATGTCCTTCACGACATGGCGGCGGAAAAGCTTTCGGCCAAGGTCACAGACCGGTTCTGGAACGAACACAATTTCGTTTTCCGGAAGTCGGATGGGTTGTTTTACCACGGAAAGGGTGCGACACCCGCCTTCGACAAATGGGCCGACGACGCGACCGATCTCACAATCATTCCGCTCAACATGGCGGAACCCGTGCTGATCGTTCGTGGAACGAATGCTGCTCATGGTCTCGGCTTCTCGCCGCATGGTGCCGGCCGTAATATTTCGCGCAGCGCGCATATACGGCAGCTGGCCGCGGAGTATGGGGCGGACTCACGTGGGCTTAGCCCGAACAACATCGCAGCAATCCTGGAGAAGGAGACAAGCGGTCTCGACGTACGCTTCTTCTCCGGTTTTGCCGACGTGTCGGAATTGCCGAGCGCCTACAAGAGCGCCGCCAACGTGCGGGCGCAGATTGAGCATTACGGTCTTGCCGAAGTGGTCGACGAGGTGATCCCGTTTGGGAGCATCATGGCCGGCGATTGGCAGAAGAATGCGCCCTGGCGCAAAAAGCGCCTGTAA
PROTEIN sequence
Length: 469
MSGQDLIDAGMSQGKWFRPALDAANAILSKGGSMADALEAAKAFQPGPTLALRADNDIEIYSNIRAENAFEQDNVEKVNATMRALVRTPVVRSAAIMPDACPAGPIGTIPVGGVVASEAIHPGMHSADICCSMAISIFPGVDPKALLDAVHSVTHFGPGGRPRGAQIKPSEATLSAFEQNPYLRDGALSVGIEHFATQGDGNHFAYVGTMKSTGETALVTHHGSRAPGARLYDKGMKVANRFREQISPETHRENAWIPADTEEGDLYWSALQTIRRWTKENHYVLHDMAAEKLSAKVTDRFWNEHNFVFRKSDGLFYHGKGATPAFDKWADDATDLTIIPLNMAEPVLIVRGTNAAHGLGFSPHGAGRNISRSAHIRQLAAEYGADSRGLSPNNIAAILEKETSGLDVRFFSGFADVSELPSAYKSAANVRAQIEHYGLAEVVDEVIPFGSIMAGDWQKNAPWRKKRL*