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SCNpilot_cont_300_bf_scaffold_2389_10

Organism: SCNPILOT_CONT_300_BF_Devosia_67_7

partial RP 40 / 55 MC: 3 BSCG 39 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 6333..6881

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J868_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 182.0
  • Bit_score: 298
  • Evalue 5.40e-78
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 178.0
  • Bit_score: 315
  • Evalue 4.60e-83
rpoE4; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 182.0
  • Bit_score: 297
  • Evalue 3.40e-78

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
TTGCAGGAATCCCCGTCGTTCAAGCGGGAGTTGCTGGCGACGTTGCCGTCGCTTCGCGCCTTCGCGGTGTCCCTGAGCGGGCGCCACGACCGGGCCGACGATCTCGTGCAGGACACGATGATGAAGGCCTGGGCCAAGCAGGACAGCTACCAGATGGGCACCAATATCAAGGCCTGGCTGTTCACGATCCTGCGCAACGAGTTCTATTCGCAGATGCGCAAGCGCGGCCGCGAGGTGCAGGACACCGACGGCGCCTTCACCGAGCGGATGTCGGTGCACCCCAGCCAATACGGCGTGCTCGACATGGCCGATTTCAAGAAGGCGCTCGACACGCTGCCGCCGGACCAGCGCGAGGCCATCGTGCTGATCGGCGCCTCGGGCTTCTCCTACGAGGAGGCGGCCGAGATCTGCAAATGCGCCGTCGGCACCATGAAGAGCCGGGTCAGCCGCGCCCGCACCCGGCTGCAGGACATCCTGAAGATTTCCGGCGAGGCCGATTTCGGTCCCGACGCGGTGTCGTCGCAGGTCACCACGCATTCGCTGACCTGA
PROTEIN sequence
Length: 183
LQESPSFKRELLATLPSLRAFAVSLSGRHDRADDLVQDTMMKAWAKQDSYQMGTNIKAWLFTILRNEFYSQMRKRGREVQDTDGAFTERMSVHPSQYGVLDMADFKKALDTLPPDQREAIVLIGASGFSYEEAAEICKCAVGTMKSRVSRARTRLQDILKISGEADFGPDAVSSQVTTHSLT*