ggKbase home page

SCNpilot_cont_300_bf_scaffold_2907_3

Organism: SCNPILOT_CONT_300_BF_Devosia_67_7

partial RP 40 / 55 MC: 3 BSCG 39 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3230..3649)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 139.0
  • Bit_score: 170
  • Evalue 1.40e-39
Ribonuclease VapC n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DR3_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 139.0
  • Bit_score: 170
  • Evalue 9.90e-40
PilT protein-like protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 139.0
  • Bit_score: 170
  • Evalue 2.80e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGAGCTCTGAGGTGATGATCGACACCAACATCATCGCCTACGCCGCGTCCCGTGCCGCAGAGGACGCGCGCAAGGCGGCGCACGCTCGTGACCTGATCAAGAAGCTGGATTTCGCTATCTCGGGCCAGATCCTCCAGGAATTCTACGTCACCGTCACCCGCAAGATGCGGGTGCGCCTGTCGCATGAAGAGGCGCTGGACTGGCTCGATCTGCTCAACGAGCTGCCTTGCGTCGGCATAGACCCGTCACTGGTCCGGCGCGGCGCGGTGATTGCCGAGACCAATCGCATTTCGTACTGGGACGGCGCGGTGATCGCGGCCGCCGAGCGCTCCGGCGCCAGCATCCTTTACACCGAAGATCTCAATCACAACCAGCTCTACGGCGCGGTCCGGGTGCTGAATCCATTCCTCGAAAACTGA
PROTEIN sequence
Length: 140
MSSEVMIDTNIIAYAASRAAEDARKAAHARDLIKKLDFAISGQILQEFYVTVTRKMRVRLSHEEALDWLDLLNELPCVGIDPSLVRRGAVIAETNRISYWDGAVIAAAERSGASILYTEDLNHNQLYGAVRVLNPFLEN*