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SCNpilot_cont_300_bf_scaffold_9566_6

Organism: SCNPILOT_CONT_300_BF_Devosia_67_7

partial RP 40 / 55 MC: 3 BSCG 39 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3470..3982)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7E6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 167.0
  • Bit_score: 224
  • Evalue 7.10e-56
RNA polymerase sigma factor {ECO:0000313|EMBL:KFL25358.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8 similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 167.0
  • Bit_score: 239
  • Evalue 3.00e-60
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 168.0
  • Bit_score: 212
  • Evalue 1.00e-52

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGTCCCAGCAGTTCCTGGACGAGATCGAGCTCTGCGTGCCGGCGCTCCGCCGCTATGCGCGGGCGCTCACGCGCAACGCCGACCGCGCCGACGACCTCGTCCAGGACTGCCTCGAGCGGGCCATCCGCAAGCAGGCGCTGTGGAAGCCGACCGGGCCGCTCAAGGCCTGGCTGTTCCGCATCCTGCTCAATCTCTACCGCAACGAATTGCGCGTCGTGCGCCGCCGCGGCGAGCACCTGGCGGTGGAGGCCCTGGTGGCCGAGCCGGCCGTCGCCCCGGCGCAGCCCGGCCGCATCGCCCTGGCCGAGATGGCGCGCGCCATCGAAACCCTCGCGGCCGAGCAGCGCGAGGCGCTGCTGCTCGTCGTGCTCGAGGGCATGAGCTACGCCGAGGCCGCCACGGCGCTCGGCATTCCGATCGGAACATTGATGTCGCGCCTCGGGCGCGCCAGGGCCGCGCTGCGGACCGCGACCGGCGGTGCCGAGGAGCCCAGACTGAGGACTGTGAAATGA
PROTEIN sequence
Length: 171
VSQQFLDEIELCVPALRRYARALTRNADRADDLVQDCLERAIRKQALWKPTGPLKAWLFRILLNLYRNELRVVRRRGEHLAVEALVAEPAVAPAQPGRIALAEMARAIETLAAEQREALLLVVLEGMSYAEAATALGIPIGTLMSRLGRARAALRTATGGAEEPRLRTVK*