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SCNpilot_cont_300_bf_scaffold_890_18

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

near complete RP 42 / 55 MC: 3 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(20728..21141)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TDC7_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 83
  • Evalue 2.10e-13
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 83
  • Evalue 5.80e-14
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABC24192.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 83
  • Evalue 2.90e-13

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Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGTCAGGACGCAAGAGCAACGCGAGATCAGGCGAAGCGCCCCACCCTGTCGATGTGATCGCAGGGCGGAACCTGCATATCGCGCGCACGCTCGCGGGCTACACGCAGCAGCGGCTTGCCGATGAGGTCGGGCTGACGTTCCAGCAGATTCAGAAGTATGAGAACGCCAAAAGCCGCATGTCGATCTCGCGCGCGTGGCAGTTCTCACAATTGCTCGGCATCAGCTTCTCCGCCTTCGTCGAAGGCGCGGACGATAAGCCGATCGACTGGGCGATGAGCGGCCCGGAATTCAATGAGTGGCTATCTCTGTATGTCAGAGCGCGAAAGACAGATCAGCTTCCGGAGATTACTGCGGTTGCTAGCCGTATCGTGAAGCTATGTGAGCCTGACCCCGAGCATTCGCAATGTCGGTGA
PROTEIN sequence
Length: 138
MSGRKSNARSGEAPHPVDVIAGRNLHIARTLAGYTQQRLADEVGLTFQQIQKYENAKSRMSISRAWQFSQLLGISFSAFVEGADDKPIDWAMSGPEFNEWLSLYVRARKTDQLPEITAVASRIVKLCEPDPEHSQCR*