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SCNpilot_cont_300_bf_scaffold_1877_21

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 20065..21021

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2J2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 242.0
  • Bit_score: 144
  • Evalue 2.30e-31
DNA, contig: SP659 {ECO:0000313|EMBL:GAN15535.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 242.0
  • Bit_score: 144
  • Evalue 3.20e-31
RND transporter similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 255.0
  • Bit_score: 136
  • Evalue 1.30e-29

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGCGATCTGAGCGCCGCCTAACCGTCGCCGTGCTGCTGGCCGGCCTTCTCGCTGGTTGCGCCCAACCCTTGACCTTGGCGGAGCTGAATCTCACCGACAGCTACTACGCCAGCGAACCCGACGCCGCGCCGCTGCAACCGGCGACGCTGGAGCGTTGCTGGAACTGGCTGGACGATGCGCGGCTGGCCGAGTTGGAGGACAGCGAGGGTCTTTCCCCCGCGACCAAGGCCGAGATCGCCGCGCGCTACAGCCTGATGCGGGCGCGGCAAACCCAGGTTGATAACGCCCGCGCCTACCTCGCCGCCCAGCAGGACAATCTGGAGATCGCCCGTTTTCGCGAACAGGCGGGCCTTGTGACGACGCGGGACGCCGTCCAGGCCGACGCCGAGCGCGCGCGTGTCGCTGCGACCATTCCGGCGCTCGAAGCCGGCATCGCCGCCGACGCCAGCCGCATCGCCGTGCTGAGCGGCCAGGCCCCCGTCGCCCTGCGCGACCGGCTGGTGCTACCCGGACCGATCCCCAACGAGCCTGCCGAGATCGCCGTGGGCACGCCATCCGACCTGCTGGCGCGGCGGCCCGACCTGATTGAAGCCTCCAAGAAGATGCAGACGGCGTGGCTGAAGGCGGCCTCGCCGCAGGCCGGCTATCGCGCGGCGGTGCTGGCCGCGCTGGAAGATGTGGAAGATGCGCGCTCGACCTTCACCGGATCGGTCGCGCGAGCGCTGAGCCTCTCGGCCGCCGAGCAAAAGGCCACCGAGCTGACGCGGTTGACGCGGACCCAGTATCGCGACGGCCAGGCCGACTATGCAGCGCTTTCGGGCGCCGAGACGGCCCTGCTGGACACCCGCGACGCCCTGGCGACCGCGCGGGCCGAGCGGGCGGGGGCGGCGATCCGGCTGTGCGTGGCGCTGGGCGGGGGCGCGCCCCTGCCGGCCGCCAAGTCGGCGTCGAAGTAG
PROTEIN sequence
Length: 319
MRSERRLTVAVLLAGLLAGCAQPLTLAELNLTDSYYASEPDAAPLQPATLERCWNWLDDARLAELEDSEGLSPATKAEIAARYSLMRARQTQVDNARAYLAAQQDNLEIARFREQAGLVTTRDAVQADAERARVAATIPALEAGIAADASRIAVLSGQAPVALRDRLVLPGPIPNEPAEIAVGTPSDLLARRPDLIEASKKMQTAWLKAASPQAGYRAAVLAALEDVEDARSTFTGSVARALSLSAAEQKATELTRLTRTQYRDGQADYAALSGAETALLDTRDALATARAERAGAAIRLCVALGGGAPLPAAKSASK*