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SCNpilot_cont_300_bf_scaffold_1461_4

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(4905..5522)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter sp. AP07 RepID=J2HK75_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 245
  • Evalue 3.60e-62
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL36098.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 245
  • Evalue 5.00e-62
RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 239
  • Evalue 7.20e-61

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGTCGCAGAGCCGTAGAGAGATCGTCGCCTGGGTGGGGGCCCAGGTGCTGCCTCACGAGGCGGACGTTCGCGCCTGGCTCCGCCGCAAGGGCGCCGCGCCCGACGAGGTCGATGATGTGGTGCAGGAGACCTACTGCCGCCTCGCCGCCCTGCCTCGCGTCGACCACATCGCCAACGGACGCGCCTACTTCTTCCAGTCCGCGCGCAACGTCGCCGCCGAGCGGGCCCGCCGGGCGCGGGTCGTGCGCCTCGACTGGCTGACGGAAATCGAGTTGGAGCGCATCGTAGATAGCGAGCCCATCGCGGATCGGGTCCTGGCCGGTCGCCAGGAACTCCGCCGGATCGAACGTCTCATCGAAGCCTTGCCCGAACGATGCAAAGAGATCTTCAGACTGCGGCGCATCCAAGGGATCTCCCAAAAGGAGATTGCCCAACGCCTGAACGTGACCGAAAACGTGGTCGAGACCCAGGCGACACGAGGTCTCCAGCTGATCCTGGCCGCCCTGGCGACCAGCGAGGCGCTGAGCGATGAGCGGACACGGGAAGCGTCCAATGAGAAGCGGGCAAACCGCCGGCGAGATCGACGACGAGGCGGCGCGCTGGGCGATCCGCTGTGA
PROTEIN sequence
Length: 206
MSQSRREIVAWVGAQVLPHEADVRAWLRRKGAAPDEVDDVVQETYCRLAALPRVDHIANGRAYFFQSARNVAAERARRARVVRLDWLTEIELERIVDSEPIADRVLAGRQELRRIERLIEALPERCKEIFRLRRIQGISQKEIAQRLNVTENVVETQATRGLQLILAALATSEALSDERTREASNEKRANRRRDRRRGGALGDPL*