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SCNpilot_cont_300_bf_scaffold_2159_21

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(20298..21797)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ3_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 503.0
  • Bit_score: 739
  • Evalue 2.50e-210
  • rbh
rpoN; RNA polymerase factor sigma-54 similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 503.0
  • Bit_score: 737
  • Evalue 2.10e-210
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phen similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 503.0
  • Bit_score: 737
  • Evalue 1.00e-209

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Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
GTGGCGCTCAGTCCGCGTCTAGAGCTCAGGCAGGGGCAGAGCCTCGTCATCACGCCGCAGCTGCAGCAGGCGATCAAGCTGCTGCAGCTGTCGAACCTCGAGCTCGAGGCCTATGTCGAGGGCGAGCTGGAGCGTAACCCGCTGCTCGCCCGCGATGAGCCTGTCGCCGAGGCGCCCGAAGCGTCGGACGGCGAAGCCGTGGGCTCGGCCACCGAGTATGACACCGACCATGTGCCCGACAGCGCCGCCCAGGCGGAGATGGACGGCGGCGGCGACGACGCCTCCCCCGGCGAACGCCACAGCGGCGAGGCCGCCCCGGGCGAGCAGGCCGGCGGCCAGATCGACTGGTCACGCGCCGGCCGCGGCGGCGCATTCGAGGGCGACGAGGGGCTGGAAGGCGCGCTCGCCCGCGAAAAGACCCTGCATGAACATCTGCACGACCAGCTGGCCGTCACCGGCCTGGAAGGTCGCGAACGCGCCATCGCCACCATCCTGATCGATGCGGTCGACGAGGGCGGCTATCTGCGCGCCGACCTCGGCGAGATGGCCGAGCGCCTCGGCTGCGACCTCGCGGTGATCGAGACGACACTCGCGCGGCTGCACGGCTTCGAGCCGGTCGGCGTCCTGGCGCGCGATGTCCGCGAGTGCCTGGCCCTGCAGCTGAAGGACCGCAATCGCTACGATCCGGCCATGGCCGCCTTGCTCGACAATCTGGAGCTGGTCGCCCGCCGCGACATGTCGGCCCTCAAGAAGGTCTGCGGCGTCGACGACGAAGACCTGCGCGAGATGATCGCCGAGCTGAAGGCCCTCACCCCCCGCCCGGGCGCCGCCTTCGGCAGCGAGCCGGTGCAGGGCGTGACGCCCGACGTACATGTGCGCGAAGGCCTCGGCGGCCTCTGGCACGTGGAGCTCAACACCGACACCCTGCCGCGCGTGCTGGTCGACCAGCGCTACCACGCCCGCGTCGCCGGCGGCGCGCGCAGTGATCAGGAGAAGACCTTCGTCTCCGATTGCCTGGCCAGCGCCAACTGGCTGGTCAAAAGCCTCGATCAGCGGGCCAAGACCATTCTCAAGGTCTCCAGCGAGATCGTGCGCCAGCAGGACGGCTTCCTGGCCTTCGGCGTTGAGCACCTGCGCCCGCTGAACCTGAAGACCGTCGCCGACGCGATCGGCATGCACGAGAGCACCGTCAGCCGGGTGACCTCGAACAAATACATCTCCACCCCGCGCGGGGTGTTCGAGCTGAAGTTCTTCTTCACCTCGTCCATCGCCTCGGCCGATGGTGGCGAGGCCCATTCCGCCGAGGCGGTGCGTCACAAGATCAAGGGGCTGATCGAGGCGGAGACCAGCGAGTCCACCGTCCATTCGGACGACCGCCTGGTCGAAATCCTCAAGGAGACCGGCGTCGACATCGCTCGCCGCACGGTCGCCAAGTACCGTGAAGCCATGCGCATCCCGTCGTCGGTGGAGCGCCGCCGAATGCTGCGAGGCGCGGCCTGA
PROTEIN sequence
Length: 500
VALSPRLELRQGQSLVITPQLQQAIKLLQLSNLELEAYVEGELERNPLLARDEPVAEAPEASDGEAVGSATEYDTDHVPDSAAQAEMDGGGDDASPGERHSGEAAPGEQAGGQIDWSRAGRGGAFEGDEGLEGALAREKTLHEHLHDQLAVTGLEGRERAIATILIDAVDEGGYLRADLGEMAERLGCDLAVIETTLARLHGFEPVGVLARDVRECLALQLKDRNRYDPAMAALLDNLELVARRDMSALKKVCGVDDEDLREMIAELKALTPRPGAAFGSEPVQGVTPDVHVREGLGGLWHVELNTDTLPRVLVDQRYHARVAGGARSDQEKTFVSDCLASANWLVKSLDQRAKTILKVSSEIVRQQDGFLAFGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYISTPRGVFELKFFFTSSIASADGGEAHSAEAVRHKIKGLIEAETSESTVHSDDRLVEILKETGVDIARRTVAKYREAMRIPSSVERRRMLRGAA*