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SCNpilot_cont_300_bf_scaffold_2619_10

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(11183..12286)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC20 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 357.0
  • Bit_score: 430
  • Evalue 1.80e-117
Putative efflux pump periplasmic linker protein {ECO:0000313|EMBL:GAO37883.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.; similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 359.0
  • Bit_score: 415
  • Evalue 6.50e-113
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 366.0
  • Bit_score: 413
  • Evalue 8.50e-113

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
GTGGTCGGGTTCGGCGTGGCGGCGCGCGTGCGCTCGACCTCCGAACTGAAGACCACCGCCACGGAGTCTGCGGTCCCGTCGGTGTCGGTGATCCAGCCCAAGGCCGGCGGCAAGGCCGAGACCCTGACCCTGCCGGCCAACCTGCAGGCCTACAACACCGCCCAGATCTTCGCCCGCACCACCGGCTATGTGAACCGCTGGCTGGTCAACATCGGCGAGCCGGTGCGGCGCGGCCAACTGCTGGCCGTGCTCGACGCGCCCGATGTGCAGATGCAGCTGGATCAGGCCCGCGCCGACCTGCAGACCGCCCGCGCCCAGCAGCAGCTGGCCCGCACCACGGCCGACCGCTGGAGCACCATGCTGGCCAAGGACGCGGTCTCCCGGCAGGAGTCGGATGAGAAGCAGGGCGACCTGGCGGCCAAGACCGCCGTGGCCGCCGCCGCCCAGGCCAACGTCGGGCGCCTGCAGACCCTGACCGGTTTCACCCAGCTGACCGCGCCGTTCGACGGCGTCGTCACCACCCGCTCGGCCGAGATCGGGGCGCTGGTGATCACCGGCGTTTCGGCGACGCCGCTCTACACCGTGGCGGACGTCTCCCGCATGCGGGTCTTCGTGCGCGTGCCGCAGGCCTATTCCTCGCAGCTTTCCATCGGGATGCCGGTGAAGCTGACCGTGCCGGAATATCCGAACCGCACCTTCGACACGACGCTGGTGCGCACCGCCGGCGCGGTGGACGCCGCCTCGGGCGCCGTGCTCGTCGAGCTGCAGGCGGCCAACGGCGACCGGGCGCTGAAGCCCGGCTCCTACGCCCAGGTGCAGTTCCCCCTGAAGGGCGGCGGCGAAGCCGCCCTGACCCTGCCGCCGAGCGCGGTGATGATCACCGAGGACGGCCCGCAGGTGGCCCTGCTCGGCCCCAACAACCACGCTCAACTTCGTAAGGTCTCCATCGGTCGCGACTTCGGCCGCACCATCGAGATCGCCGGAGGCCTGAAGCGCGGCGACAAGGTGATCGACAGCCCGCCGGAGTCCCTGCAGGACGGCGACGAAGTGCGGGTGGTGGCCGCGGCTCAGGCGGCGACAGGTCCCGGCCGTGCGGCGCGCTAG
PROTEIN sequence
Length: 368
VVGFGVAARVRSTSELKTTATESAVPSVSVIQPKAGGKAETLTLPANLQAYNTAQIFARTTGYVNRWLVNIGEPVRRGQLLAVLDAPDVQMQLDQARADLQTARAQQQLARTTADRWSTMLAKDAVSRQESDEKQGDLAAKTAVAAAAQANVGRLQTLTGFTQLTAPFDGVVTTRSAEIGALVITGVSATPLYTVADVSRMRVFVRVPQAYSSQLSIGMPVKLTVPEYPNRTFDTTLVRTAGAVDAASGAVLVELQAANGDRALKPGSYAQVQFPLKGGGEAALTLPPSAVMITEDGPQVALLGPNNHAQLRKVSIGRDFGRTIEIAGGLKRGDKVIDSPPESLQDGDEVRVVAAAQAATGPGRAAR*