ggKbase home page

SCNpilot_cont_300_bf_scaffold_2619_20

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 22261..22971

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent siderophore receptor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAR4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 196.0
  • Bit_score: 195
  • Evalue 4.90e-47
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33581.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 196.0
  • Bit_score: 196
  • Evalue 4.00e-47
tonb-dependent siderophore receptor similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 196.0
  • Bit_score: 195
  • Evalue 1.40e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGACTCACATTCGCAGCCGTAAACACGTGGTCGCCGCTCTCGCGCCGCTCGGCGCCGCCTCGCTCATGGCCCTCGCCGCCGCTCCGGCCTTTGCCGCCGACGCCGTCGCGGCCGACGACCAGGCAGGCAACCTGGTCACCAGCGTCGATGTCACCGCCAAGGCCCACTACAAGACCGAAACCGTCAACGCCAAGGCGACGACCTCCCTCCTCGACACGCCGCAAACCCGTCAGATCATCGGCGCGGAGCTGATGCAGGAGCGCGGCGCCACCACCCTCACCGAGGCGCTCCAGAACTCCCCGGGCGTCGGCACCTTCTTCCTCGGCGAGAACGGCAACACCAACACCGGCGACGCCATCTACATGCGCGGCTCGGACATCTCCGGCAGCATCATGATCGACGGCGTTCGTAACGTCGGCTCGATCTTCCGCGATGTGTTCAACATCGATCAGGTGGAAGTGCTGAAGGGCGGCGCGGGCGCCGAAATCGGCCGTGGCGCGGCCACCGGCGCGATCAACATGTACACCAAGCATGCGTCGCTGAACGACTTCAAGGCCGGCTCGGTGCCGGCGTCGCCGGCCGCGATCACATCGCCAACGACCGCTGGGGCATCGCGCCGACGGTGGGCTTCGGGCTGGACAGCTCGACCCGCGTGTTCCTCGACTACATGTATATCAAGCAGGACAACGTGCCGGACGGCGGCGTGCTGA
PROTEIN sequence
Length: 237
MTHIRSRKHVVAALAPLGAASLMALAAAPAFAADAVAADDQAGNLVTSVDVTAKAHYKTETVNAKATTSLLDTPQTRQIIGAELMQERGATTLTEALQNSPGVGTFFLGENGNTNTGDAIYMRGSDISGSIMIDGVRNVGSIFRDVFNIDQVEVLKGGAGAEIGRGAATGAINMYTKHASLNDFKAGSVPASPAAITSPTTAGASRRRWASGWTARPACSSTTCISSRTTCRTAAC*