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SCNpilot_cont_300_bf_scaffold_3632_12

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 12840..14366

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigJ n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X251_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 286.0
  • Bit_score: 377
  • Evalue 1.90e-101
sigJ; RNA polymerase sigma factor SigJ similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 286.0
  • Bit_score: 377
  • Evalue 5.50e-102
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:AFL49957.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 286.0
  • Bit_score: 377
  • Evalue 2.70e-101

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGACAGCGCAGGACGCCGCCCTCAGCTTCGATCCCTTGCGGCCGAGGCTCACCCGCATCGCCTACCGTATGCTCGGCTCCCTCGCCGATGCCGAGGACGTGGTGCAGGAGGCGTTCCTGCGCTGGCTCGCTACAGATCGGGCGACGGTGCAGGAGCCGGGGGCCTACCTCGCCCGCACCGTCACCCGGCTGTGCCTCGACGTGCTGAAGTCCGCCCGCCGCAAGCGTGAGGTCTATGTCGGCCCCTGGCTGCCCGAGCCCGTCGTCGACGCCGAGCAGGACGCCGACGCCCTGGCCGACGACATCACCCTGCCGCTGATGCTGGCGCTCGATCGTCTCTCGCCGCTCGAGCGGGCCGCCTTCCTGCTGCACGACGTGTTCGGTGTCGCCTTCGAGGAGATCGCCGAGACCCTGGGCCGTGAGCCCGCCGCCTGCCGTCAGCTCGCCAGCCGCGCCCGCACGCATGTGCGCGCCGCCCGCCCGCGTTTCCCCACGCCGCCCGAGCGCGGCATGCAGATCGCCGAGGCCTTCTTCGCCGCTTCCCGCACCGGCGACATGTCCAGCCTGCAGTCGCTGCTGGCCGAGGACGTGGCGATATACGCCGACGGCGGCGGCCTGCGCTCGGCCTTCTACCGCACCCTCGTGGGTGTCGCCGAGGTTATGACCGTCCACACCGCCCTCTACGAGCGGGTCTTCCTGCGGCTCGGCGGGTCGGAACTGGTGCGCTACGGCCTGATCAACGGCCTTCCAGGCTTCATCTCCCGCGAGCCGGACGGCCTGCTCCAGACCACCGCCTTCCTTATCGAGGACGGCCGCGTCGCCGCCATCTACGTCATGCGCAATCCGGAGAAGCTGACCCGGCGTCACCGCCGCCGCCTGCACGCGCGCCCAGTCGGCGTCCGACTGCAGCGGCAGGCCCGAAAAGCTTCCCACCGCCGCGCCGGCCAGCACCAGTTGCTGCACGGCGGCGATCAGCAAGGCATTGAACGCCGGGGCGTCGACGCCTTCGGGCGGCGTCAACGCGCCCCGCGTTTTCGCGACCCATCGCATCATCGCCGTGCCCCGCGCCGCCGCCAGTCGCGCGACCAGCGGGGAGGGGGCCGCCAGCTCCCAGATGGCGATCCGTTGCACCAGCGGGTCGGCCCGCAGCGCCGCCAGGAAGCGCAGCACCAGTTGCTCGACCAACTCGGCGTAGGTCCGGGGCGGCGCGTCCTCGCTCAAGAGCTCGCGCTCCAGCCAGCCCGCCAGATCGAGCCCGATGGCGTCGACCAGCCCATCCAGTCCGCCGAAATAGCGATAGATCAACTGCTTGTCGCAGCCGGCCCGCCGGGCCACGGCGTTGACGCCGAACCCCTGGAAGCCGTCCTCGGCCAGCACCACGCGGGCCGCCGCCAGGATGTCGGCCTCGGTGCGGGCCCGGTCGCGCGACCGGCTGTCTCTCGCTGTGGGCTCGTCGCTCATTTCGTCTGCCTAGGGCCTGGCTCAGCCTGTGTCCAGACATCAAGTCACGCATCGGTGACAAATTGA
PROTEIN sequence
Length: 509
MTAQDAALSFDPLRPRLTRIAYRMLGSLADAEDVVQEAFLRWLATDRATVQEPGAYLARTVTRLCLDVLKSARRKREVYVGPWLPEPVVDAEQDADALADDITLPLMLALDRLSPLERAAFLLHDVFGVAFEEIAETLGREPAACRQLASRARTHVRAARPRFPTPPERGMQIAEAFFAASRTGDMSSLQSLLAEDVAIYADGGGLRSAFYRTLVGVAEVMTVHTALYERVFLRLGGSELVRYGLINGLPGFISREPDGLLQTTAFLIEDGRVAAIYVMRNPEKLTRRHRRRLHARPVGVRLQRQARKASHRRAGQHQLLHGGDQQGIERRGVDAFGRRQRAPRFRDPSHHRRAPRRRQSRDQRGGGRQLPDGDPLHQRVGPQRRQEAQHQLLDQLGVGPGRRVLAQELALQPARQIEPDGVDQPIQSAEIAIDQLLVAAGPPGHGVDAEPLEAVLGQHHAGRRQDVGLGAGPVARPAVSRCGLVAHFVCLGPGSACVQTSSHASVTN*