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SCNpilot_cont_300_bf_scaffold_2508_18

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_21_fragment

partial RP 4 / 55 MC: 1 BSCG 10 / 51 MC: 4 ASCG 4 / 38 MC: 3
Location: comp(16810..18363)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378CB9A similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 513.0
  • Bit_score: 691
  • Evalue 6.20e-196
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 521.0
  • Bit_score: 614
  • Evalue 2.70e-173
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novell similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 521.0
  • Bit_score: 614
  • Evalue 1.40e-172

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
GCCATCAAGCTGCTCCAGCTCTCCAATCTCGATCTCATCAGCTATGTCGAGGCCGAACTCGAGCGCAATCCGCTCCTGGAGCGTGACGAGCGCGAGGACGGCGACGATATCGTCGCGGGTCCGGGCAAGGCCTCGATCGAGAGCGACGGCTTTTCAGGCGAGGACGGTGCCGGGTCGACGGAAGGCTTCTCCGGCGAGCGCGACGGGGATAGCGGCGAAGCCGGTGACTGGTCCGAGGCCGGCGCTGGCAGCGACTGGCTCGAGACGCGGCTCGAAACCTCGGCCGATGCGATCGGCGACCGGCTCGACGCTGACCTTTCCAACGTGTTTCCGGACGATCACGGCCATGCCGGCGGCGATCCCTCGCCGCAGCCGGCCTTCGATCCCTGGGCGAGCCAGCCCGGCCGCCAGCAAGCGAGCTGCGAGGACTACAATCTCGAAGCCTTCGTGGCCGGCGAGAAGTCGCTCGCCGACCATCTCGCCGACCAGCTCGGCCTCGCCGTCACCGACCCGACGCGCCTCATCATCGGCCATGCGCTGATCGACGAGGTCGACGAGGCCGGCTATATCCGCGCCGATCTTTCGGCCCTCGCCGAGCGGCTGGGCGCCCCGATGGCGCTGGTCGAGGAGGTGCTGGCGACGCTGCAGGGCTTCGAGCCGACTGGCATCTGCGCCCGCGACCTTTCCGAATGCTTGGCGCTGCAGCTTGCCGAGAAGAACCGGCTCGATCCGGCGATCAAGGCACTGCTCGATCATCTCGACCTCGTCGCGCGCCGCGATTTCGCCGCCCTGAAGCGCGTCTGCGGCTGCAACGAGGACGATATCGTCGACATGCTCGCCGAATTGCGCGCGCTCGATCCGAAGCCCGGCGCTTCGTTCGGCTCGGCGCCGGTGCAGCCGATCGTGCCGGACGTGATGGTGCGGGCGGCCCCGGACGGCAGCTGGCTCATCGAACTCAACACCGAGACACTGCCGCGGGTGCTCGTCAACAACAGCTATCTCGCCAGCGTGCCGCGCGGCAGCCGGCCGGATACCGAGCGCGCCTATCTGGCCGAGTGCCTGCAGACCGCCAACTGGCTGGTGAAGAGCCTCGATCAGCGCGCCAAGACGATCCTGAAGGTCGCCACCGAAATCGTCCGCCAGCAGGACGGCTTCCTGACGCATGGCGTGCGGCATCTGCGTCCGCTCAATCTGAAGACCGTGGCCGAGGCGATCGGCATGCACGAGTCGACCGTCTCGCGCGTCACCTCCAACAAATACATGGCGACCTCGCGCGGCATCTTCGAGCTGAAATACTTCTTCACCTCGGCGATCGCCTCGTCCGAAGGCGGCGAAGCGCATTCGGCCGAATCCGTCCGTCACCGCATCCGCACCCTGATCGATGCCGAGAGCGCCGACGATGTGCTGAGCGACGACACGCTGGTGAAGCTCCTGCGCGACGCCGGCATCGACATCGCGCGCCGGACGGTCGCCAAGTACCGGGAAGCACTGCGCATTCCCTCCTCGGTCCAACGCCGCCGCGAGAAGCAGGCCGAGCTTTCCGCCAACCGCTGA
PROTEIN sequence
Length: 518
AIKLLQLSNLDLISYVEAELERNPLLERDEREDGDDIVAGPGKASIESDGFSGEDGAGSTEGFSGERDGDSGEAGDWSEAGAGSDWLETRLETSADAIGDRLDADLSNVFPDDHGHAGGDPSPQPAFDPWASQPGRQQASCEDYNLEAFVAGEKSLADHLADQLGLAVTDPTRLIIGHALIDEVDEAGYIRADLSALAERLGAPMALVEEVLATLQGFEPTGICARDLSECLALQLAEKNRLDPAIKALLDHLDLVARRDFAALKRVCGCNEDDIVDMLAELRALDPKPGASFGSAPVQPIVPDVMVRAAPDGSWLIELNTETLPRVLVNNSYLASVPRGSRPDTERAYLAECLQTANWLVKSLDQRAKTILKVATEIVRQQDGFLTHGVRHLRPLNLKTVAEAIGMHESTVSRVTSNKYMATSRGIFELKYFFTSAIASSEGGEAHSAESVRHRIRTLIDAESADDVLSDDTLVKLLRDAGIDIARRTVAKYREALRIPSSVQRRREKQAELSANR*