ggKbase home page

SCNpilot_cont_300_bf_scaffold_2524_13

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_21_fragment

partial RP 4 / 55 MC: 1 BSCG 10 / 51 MC: 4 ASCG 4 / 38 MC: 3
Location: 11783..12388

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003810162 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 189.0
  • Bit_score: 303
  • Evalue 1.80e-79
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KGM31110.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="In similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 197.0
  • Bit_score: 292
  • Evalue 4.60e-76
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 189.0
  • Bit_score: 286
  • Evalue 5.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCGCCCTCATCGTTCCCGTCGGCCTGCCGCGTCGTCGACGATCGGCATTCCGATACCGTCACCATCGACAATGTCGCCGCAGCGAGCCAGGTGACGAACTATCTGCTCGATCTCGGCCATACGCGCATCGGATCGATCACCGGCCCGCTGCATCTGACGACGGGTCGCGGGCGGCTCGACGGCATGCTGGAGGCGATGGCGCGGCGCGGCGTCGCGCCCGAGCCGGGCCATGTGCGCTCGGGCGAATTCCGCGAGGATGTCGCCTATTCCGTGGCGCGGGAAATGCTCGATCGGCCCGACAGGCCGACGGCCCTCTACGTCGCCAATGGCGTGATGGCGCTCGGCGTGATGCGGGCCTTGGCCGATCTCTCGATCCACTGCCCCAACGACATCTCGATCGCCTCGACCGACACGATCTCCGGCATCGGCGGCCTCAGGCCGCGGCTGACGCGAACCGAACACCCCATCATCGAGATGACCAACGAGGCGCTGCGCCTCCTGGTCGATCGCATCCATCGCGGCAAGGACAAGCCGCCGCGCAACGTCGTCTTCCAGCCGGCCCTCGTCCTCGGCGAGAGCTGCGCGCCCTTGCGGCGGGGCTGA
PROTEIN sequence
Length: 202
MAPSSFPSACRVVDDRHSDTVTIDNVAAASQVTNYLLDLGHTRIGSITGPLHLTTGRGRLDGMLEAMARRGVAPEPGHVRSGEFREDVAYSVAREMLDRPDRPTALYVANGVMALGVMRALADLSIHCPNDISIASTDTISGIGGLRPRLTRTEHPIIEMTNEALRLLVDRIHRGKDKPPRNVVFQPALVLGESCAPLRRG*