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SCNpilot_cont_300_bf_scaffold_6253_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_21_fragment

partial RP 4 / 55 MC: 1 BSCG 10 / 51 MC: 4 ASCG 4 / 38 MC: 3
Location: comp(5315..6367)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=744980 species="Bacteria; Proteobacteria; Alph similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 350.0
  • Bit_score: 464
  • Evalue 1.20e-127
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003607C29 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 352.0
  • Bit_score: 580
  • Evalue 1.40e-162
rnr; exoribonuclease similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 352.0
  • Bit_score: 456
  • Evalue 8.40e-126

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Taxonomy

Roseibium sp. TrichSKD4 → Roseibium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
GTGCTGAAGCCGCTCTGGGCGGCCTATGCGCTGATGAAGCGGGCGCGCGACCAGCGCGAGCCGCTCGATCTCGACCTTCCCGAGCGCAAGGTGATCGTCGGCCCCGACGGCGCGATCGAGCGCATCGTCGTGCCCGAGCGGCTTGATGCGCATCGGCTGATCGAGGAGTTCATGATCCAGGCGAATGTCGCGGCGGCGGAGACGCTGGAGCGCAAGAAATCGCCGCTCGTCTATCGCGTCCATGACGCGCCATCGCTCGCCAAGCTCGAGGCGCTGCGCGAATTCCTCGCCTCGATCGAGATGAACCTGCCGAGGAGTGGCAATCTCCGGCCCGGCCACTTCAATACGATCCTCGACAAGGTCAAGGACAGCGAACACCAGGCGCTGGTCAACGAGGTGGTGCTGCGCTCGCAGAGCCAGGCGGTCTACAGCCCGGAGAATATTGGCCATTTCGGCCTCAATCTCCGCCGCTATGCGCATTTCACCTCGCCGATCCGCCGCTATGCCGATCTCATCGTGCATCGCGCGCTGGTTCGCTCGCTGGAACTCGGGGAGGGCGGGCTTCCCGATGGCGCCGAGGCGGACCTGGAACAGATCGCGCAGGAGATTTCCGGCGCCGAGCGGCGGGCGATGGCGGCCGAGCGCGAGACGGTGGACCGCCTCGTCGCGCATTGGCTGGCCGACCGCATCGGCGCGTTCTTCACCGGGCGCATCGCCGGCGTGACTCGCTCCGGTCTCTTCGTGAAGCTCGACGAGACCGGCGCCGACGGCTTCGTGCCGATCGGCTCGATCGGCGCCGATTTCTACGCCTATGACGAGGCACGCCACGCCATCATCGGCGCGCGCACCGGCGAGATGCACCAGCTCGGCGATCAGGTCGAGGTGAAGCTCGTCGAAGTGGCGCCGATCGCCGGCGCGTTGCGCTTCGAGCTGATGTCGGAGGGGCGCCGCGTGCCGAAAGGCGAGCGGCGCGTCGTCGAGCGCGGCTTCCGCGACAAGATCGCCAGGAGCCGCGCCGCGCAGAAGCCGCGGCCGGGGCCGAGGCGGCGCTGA
PROTEIN sequence
Length: 351
VLKPLWAAYALMKRARDQREPLDLDLPERKVIVGPDGAIERIVVPERLDAHRLIEEFMIQANVAAAETLERKKSPLVYRVHDAPSLAKLEALREFLASIEMNLPRSGNLRPGHFNTILDKVKDSEHQALVNEVVLRSQSQAVYSPENIGHFGLNLRRYAHFTSPIRRYADLIVHRALVRSLELGEGGLPDGAEADLEQIAQEISGAERRAMAAERETVDRLVAHWLADRIGAFFTGRIAGVTRSGLFVKLDETGADGFVPIGSIGADFYAYDEARHAIIGARTGEMHQLGDQVEVKLVEVAPIAGALRFELMSEGRRVPKGERRVVERGFRDKIARSRAAQKPRPGPRRR*