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SCNpilot_cont_300_bf_scaffold_28271_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_21_fragment

partial RP 4 / 55 MC: 1 BSCG 10 / 51 MC: 4 ASCG 4 / 38 MC: 3
Location: 6075..6863

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 245.0
  • Bit_score: 320
  • Evalue 5.40e-85
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 245.0
  • Bit_score: 320
  • Evalue 2.00e-84
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369B596 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 262.0
  • Bit_score: 434
  • Evalue 9.00e-119
  • rbh

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Taxonomy

Lutibaculum baratangense → Lutibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCCGCGCTACAAGATCCTCGTCGAATATGACGGCCGGCCCTATGCCGGCTGGCAGCGGCAGGCCAATGCGCCCTCCGTGCAGCAGACGCTCGAGGAGGCGATCCAGCGCTTTTCCGGCGAGGCGGCGGTCACCAAGGGGGCGGGCCGCACGGATTCGGGCGTGCATGCCACCGGCCAGGTGGCGCATTTTGATCTTTCGGGCATCTGGACGGGCCTCAGGATCCGCGACGCGATGAACGCGCAGCTGCGGCCGGCCCCGATCGCGGTCATCGAAGCGGCGCCCGTCTCTGACAGCTTCGATGCGCGGCGCTCGGCGACCAAGCGCCATTATCTCTATCGCGTTCTCGACCGCCGCGCGCCGGCGGCGCTCGACATCGACCGGGTGTGGGACGTGCGGCGGCGCCTCGATATCGAGGCGATGCGCGAGGGCGCCAAGCTCCTGCTGGGCAAGCATGACTTCACCACGTTCCGCTCGGCGGACTGCCAGGCGAAGAGCCCGCTGAAGACGCTCGACTCCCTCGAGATCCGGCGCTCCGGCGACGAGGTGCTGTTCGACGTTTCTGCGCGGTCCTTCCTGCACAATCAGGTGCGCTCCATGGTGGGGACGCTGAAGAAGGTCGGCGAAGGGAAATGGCCGCCCTCGAGGGTAGGCGACGTGCTGGAAGCCCGCGATCGCAAGGCCTGCGGGCCGGTGGCGCCGCCCGGCGGGCTCTATCTCGTCCGCGTCGAGTATGGCGTGCTACAGGCCGAAGAGCCGGTCGATGACCTGGCTGAGGACGATGCTTAG
PROTEIN sequence
Length: 263
MPRYKILVEYDGRPYAGWQRQANAPSVQQTLEEAIQRFSGEAAVTKGAGRTDSGVHATGQVAHFDLSGIWTGLRIRDAMNAQLRPAPIAVIEAAPVSDSFDARRSATKRHYLYRVLDRRAPAALDIDRVWDVRRRLDIEAMREGAKLLLGKHDFTTFRSADCQAKSPLKTLDSLEIRRSGDEVLFDVSARSFLHNQVRSMVGTLKKVGEGKWPPSRVGDVLEARDRKACGPVAPPGGLYLVRVEYGVLQAEEPVDDLAEDDA*