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SCNpilot_cont_300_bf_scaffold_477_13

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 11466..12065

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic domain protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETP0_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 193.0
  • Bit_score: 241
  • Evalue 8.50e-61
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 193.0
  • Bit_score: 240
  • Evalue 3.10e-61
Integrase, catalytic domain protein {ECO:0000313|EMBL:ABQ39534.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 193.0
  • Bit_score: 240
  • Evalue 1.60e-60

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Taxonomy

Bradyrhizobium sp. BTAi1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGCCGCAGGCGCTGAACCAGCGCTGGTCGCTCGACTTCGTCAGCGATCAGCTTGGCAATGGACGACGGTTCCGGCTGCTCAACGTGATCGACGACTTCAACAGCGAGTGCCTGGCGGCGGTGCCTGACTTCTCGCTGTCAGGCCTGAGAGTGATCCGCGAACTGGAGGCCATCATGGCGGTTCGCGGCAAGCCAGCGACGATCGTCTCGGACAATGGTACGGAGCTGACCAGCAACGCGGTGCTGCGCTGGGCAGCCGATCAGGGCATCGAGTGGCACTACATCGCGCCCGGCAAGCCGATGCAGAATGGCTTCGTCGAGAGCTTCAATGGGCGGATGCGCGACGAGTGCCTCAACGAACACGTCTTCACCACACTCGCCGAGGCTCGGCGGATCGTCGAGGCGTGGCGCATCGACTACAACACGGTAAGGCCGCACGGCCGCCTGGGCAGGTTGCCTCCGGCGGTGTTCGGCGCTACGCGCAGACCCGAAGAGCAACGGGGCGGGACGCTGCGCTCGATCGGGGGCTTCGCGCCCCGCCCCGTCGCACCACCCACCGAGAGAGCAAAACAGGAACAGACTCAACCTGCCGACGTGTGA
PROTEIN sequence
Length: 200
VPQALNQRWSLDFVSDQLGNGRRFRLLNVIDDFNSECLAAVPDFSLSGLRVIRELEAIMAVRGKPATIVSDNGTELTSNAVLRWAADQGIEWHYIAPGKPMQNGFVESFNGRMRDECLNEHVFTTLAEARRIVEAWRIDYNTVRPHGRLGRLPPAVFGATRRPEEQRGGTLRSIGGFAPRPVAPPTERAKQEQTQPADV*