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SCNpilot_cont_300_bf_scaffold_477_23

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(23176..23751)

Top 3 Functional Annotations

Value Algorithm Source
FecI sigma-24 factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E8E similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 188.0
  • Bit_score: 199
  • Evalue 2.70e-48
FecI sigma-24 factor {ECO:0000313|EMBL:KIJ72444.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 179.0
  • Bit_score: 203
  • Evalue 3.50e-49
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 178.0
  • Bit_score: 182
  • Evalue 1.30e-43

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Taxonomy

Tolypothrix campylonemoides → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGGTCGCTAGTTACGAGGATCTCTCGGACGGTGAACTTGTGGCGCTCAGCATCGCCGGCCGAGATCGGGCCTTCGGCCTTATCGTCCGACGGCATCGAGACGTCCTGTATCGCATTTCCTACGCCAGTCTCGGCAATGCCGACGACGCGCTCGATGCGGTTCAGGACATATTCGTGGCGGCGTTTCTGGCTCTGAAGCGGTTTGACGGGGGCCGGCCTCTCCGTCCCTGGCTCGCAGCAGTTGCGCTCAATCGATGTCGCGATCTCGCGCGGCGCCGACGCGTACGGCGGCTTTTTGCCTTCGCGCTTCCGATCGATGCCCAGATTGAATCCGTTGCCCAGGATACCCCAGGAGTCGATGTCGTCGTCGCCGACCGCGCGGAGCTTCGTCGCACGATGGTGGCAATTTCCCGGTTACCCGCCAGTCTCCGTGAACCGCTTATTCTCCATACTATAGAAGGCATGAGCCAGGCCGAAACGGCCGAAACTCTGGGAGTAAGCGAAAAGGCCGTCGAAACTCGCTTGCGTCGCGCCCGTCAGCGTTTGCGCGAGGAACTCGATCCCGAGCGCTCGTAG
PROTEIN sequence
Length: 192
VVASYEDLSDGELVALSIAGRDRAFGLIVRRHRDVLYRISYASLGNADDALDAVQDIFVAAFLALKRFDGGRPLRPWLAAVALNRCRDLARRRRVRRLFAFALPIDAQIESVAQDTPGVDVVVADRAELRRTMVAISRLPASLREPLILHTIEGMSQAETAETLGVSEKAVETRLRRARQRLREELDPERS*