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SCNpilot_cont_300_bf_scaffold_637_11

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 9408..9959

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=39 Tax=Bordetella RepID=F4LG74_BORPC similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 1.50e-67
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 183.0
  • Bit_score: 306
  • Evalue 2.10e-80
greB; transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 4.20e-68

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGCAAGGCCTTCACCAAGGAAAGCGACGGCGACGACGAAGACGACCTGCCCGACGATATCGGCGGTCTGCCGGCTGGCGCCAAGAACTACATGACCCCGCAGGGCTTCGCCCGCATGCGCGAGGAGCTGATGAACCTCATGCGCAAGGAGCGGCCCGAGGTCGTGCAGGTCGTGTCCTGGGCGGCGGCCAACGGCGACCGCTCGGAGAACGGCGACTATCTCTACGGCAAGAAGCGGCTGCGCGAGATCGACCGTCGCATCCGCTTCCTCAGCAAGCGGCTGGAGCGGTCGGAGGTCGTCGATCCGGCCAAGCGGCCCAAGACCGACCAGGTGTTCTTCGGGGCCACCGTGACCTACGCCAATGAGCGCAACGAGGAGCGCACGGTGAAGATCGTCGGCGTCGACGAGGTCGATCCGGGCCAGGGCCATGTCAGCTGGATCTCGCCCATCGCCCGGGCATTGATGCGCGCCTTCGAGGGCGACCTCGTACGCATGCGCACGCCGGGCGGCGAGGAAGAGATCGAGATCGTCAAGGTCACCTACATTTGA
PROTEIN sequence
Length: 184
MSKAFTKESDGDDEDDLPDDIGGLPAGAKNYMTPQGFARMREELMNLMRKERPEVVQVVSWAAANGDRSENGDYLYGKKRLREIDRRIRFLSKRLERSEVVDPAKRPKTDQVFFGATVTYANERNEERTVKIVGVDEVDPGQGHVSWISPIARALMRAFEGDLVRMRTPGGEEEIEIVKVTYI*