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SCNpilot_cont_300_bf_scaffold_987_21

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(17038..17511)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Novispirillum itersonii RepID=UPI0003655E4F similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 156.0
  • Bit_score: 225
  • Evalue 3.80e-56
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 157.0
  • Bit_score: 272
  • Evalue 3.80e-70
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 157.0
  • Bit_score: 218
  • Evalue 1.70e-54

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGATAGGGTTCCGATGACGGCCGAGGGGCTGAAGAGCCTCGAGGACGAATTGAAAGTGCTGAAGAGCGTGGAGCGCCCGTCGATCATCAAGGCGATCGCGGCGGCGCGTGAGCATGGCGATCTTTCGGAGAACGCCGAATATACCTCGGCGCGCGAACGGCAGGGTTTCATCGAGGGGCGGATCGCCGAGCTCGAGGACATCATCTCGCGCACCGAGGTGATCGACTTCTCCAAGCTCACGGGCAAGGTCGTGAAGTTCGGCGCCACGGTCAAACTGGCCGACGAGGACACCGACGAGCAGGTGAAGTACCAGATCGTCGGCCCCTACGAAGCCGACCTCACCAAGGGCCGCATCTCCGTCACCTCGCCGATCGGCAAGGCGCTGATCGGCAAGACCGTGGGCGACACGGTCGAGGTCCAGACCCCGCGCGGGGCCAAGTCCTACGAAGTGGTCACTGTCCAGTTCAAGTAA
PROTEIN sequence
Length: 158
MDRVPMTAEGLKSLEDELKVLKSVERPSIIKAIAAAREHGDLSENAEYTSARERQGFIEGRIAELEDIISRTEVIDFSKLTGKVVKFGATVKLADEDTDEQVKYQIVGPYEADLTKGRISVTSPIGKALIGKTVGDTVEVQTPRGAKSYEVVTVQFK*