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SCNpilot_cont_300_bf_scaffold_1837_19

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 15432..15962

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FPE5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 180.0
  • Bit_score: 173
  • Evalue 2.50e-40
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia c similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 180.0
  • Bit_score: 173
  • Evalue 3.50e-40
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 169
  • Evalue 7.90e-40

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Taxonomy

Burkholderia ambifaria → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCGGAGGCGCCGAAGCCTGACGGCCAGGCCGTCGAGCGATTTCGTATCGTCATGCTGCCGCATCTCGATGCCGCCTACGGCTTTGCGCGCTGGCTGACGCGCGATCCGATCGAGGCTCAGGATGTGGCGCAGGAGGCGATGCTCCGTGCGCTGCGCTATTTCCACGCCTTTCGCGGCGAGGAGGCGCGGCCCTGGCTGCTGCGCATCGTGCGCAACACCTGGACCGACATGCGCACGCGGCGGTCGCTGGAGAAGGTACCGCTCGACGAAGCGGACGACGTCGTCGAGCCGGGCCCCGATCCGGAACAGAGCGCGCTGGCCGGCGATCGGCGGCGCGAGATCGCGCGGGCGCTGGCGGCCCTGCCTGAGGAGGTGCGCGAGGTGCTGGTGCTGCGCGAGATCGAGGAGCTTTCCTACAAGCAGATCGCTGCCGTCCTCGACCAGCCGATCGGCACCGTCATGTCGCGCCTGTCGCGCGCGAGAGAGAAGCTGGCCGTCGCGCTCGGCGGCCGGTTGGGAAAGGAGTGA
PROTEIN sequence
Length: 177
MSEAPKPDGQAVERFRIVMLPHLDAAYGFARWLTRDPIEAQDVAQEAMLRALRYFHAFRGEEARPWLLRIVRNTWTDMRTRRSLEKVPLDEADDVVEPGPDPEQSALAGDRRREIARALAALPEEVREVLVLREIEELSYKQIAAVLDQPIGTVMSRLSRAREKLAVALGGRLGKE*