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SCNpilot_cont_300_bf_scaffold_2053_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(3..707)

Top 3 Functional Annotations

Value Algorithm Source
yfdE; L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 233.0
  • Bit_score: 300
  • Evalue 2.00e-78
L-carnitine dehydratase/bile acid-inducible protein F id=4327969 bin=GWA2_Methylomirabilis_73_35 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 235.0
  • Bit_score: 294
  • Evalue 1.00e-76
formyl-CoA transferase similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 234.0
  • Bit_score: 245
  • Evalue 1.20e-62

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCAGCCTTTGACAGGCATGCGTGTCCTCGAATTCTCGCTCAACATTGCCGGTCCCCAGGCGGGGCAGATCCTGGCCATGCTGGGCGCCGAGGTCGTCAAAGTCGAAAGGCCGCAGGGAGGCGACGATTGCCGTGCTTGGGGGCCACCCTTCGCACGCGGCTCCAGCATGATGTTCAACACCATGAACCGCGGCAAGAAGAGCATTCGCCTCGACTTGAAGGATGCCGAAGCGGTCGCATGGCTGAAGAGCCAGATCGGGCAATACGATGTGCTGATCGAAAACATGAGGCCGGGTGCCATGGAGGCCATCGGACTCGGCGCCGCCGCGATACGCTCGGCCCATCCGCGGCTTGTCTATTGCTCCCTGTCGGCTTTTGGCGCACGCGGTCCGCTGCGGAGCAAGCCGGGCTACGAGGAGGTGGTGCAGGCCTTCTCGGGTTTGTTCAGTGTAAACGGCGACGAAAGCGCTCCGCCCGCGCGTGTCGGCACGTCGATCCTCGATCTCGGCACCGGCGTCTGGGGGGCGCTTGGTTGCCTGGCCGGCTTGATGGAGCGGAGCCGCACCGGCGAGGGCTGCCTCGTGGAAGGGTCTCTGCTGGAGACTGCGCTGGGCTGGCTGACGGTTCCGATTGCGACCTTCGCGGCGTCGGGTGAACTGCCGCGCCGCTCGCGGTCCGGCAGCGCGAAAGTCGTGGTCTATCGT
PROTEIN sequence
Length: 235
MQPLTGMRVLEFSLNIAGPQAGQILAMLGAEVVKVERPQGGDDCRAWGPPFARGSSMMFNTMNRGKKSIRLDLKDAEAVAWLKSQIGQYDVLIENMRPGAMEAIGLGAAAIRSAHPRLVYCSLSAFGARGPLRSKPGYEEVVQAFSGLFSVNGDESAPPARVGTSILDLGTGVWGALGCLAGLMERSRTGEGCLVEGSLLETALGWLTVPIATFAASGELPRRSRSGSAKVVVYR