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SCNpilot_cont_300_bf_scaffold_1986_7

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 4162..4479

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XBK8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 77.0
  • Bit_score: 93
  • Evalue 1.50e-16
transcriptional regulator, HxlR family similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 77.0
  • Bit_score: 93
  • Evalue 4.30e-17
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AGU49871.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 77.0
  • Bit_score: 93
  • Evalue 2.10e-16

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGAGCTTCGCGCCAACCGCGAAAAAGAGGGACCTCGACGTGCCGGCGCAGCGGCGCCCCGACGACTTGTGGCATCTGCAGGGCGGCGCCAGGCGGCACAATGAATTGGCGGTTCTTCTGCCCGGCATCGCGCCGAAGGTGCTGTCGGAGCGTCTCGAGGGGCTGGAGCGGCGGGGCCTGATCCTGCGCGCGCCGATTGCCGCTTTCCCGCGCGGCGTTCTCTATGCGCTGTCGCCGGCCGGCAAGGAGCTGGTCGGCATTCTCGATCGCCTCGAACTCTGGTCGCGCCAGAGCATGCGCCGCCCTCAGCCCGAATAG
PROTEIN sequence
Length: 106
MSFAPTAKKRDLDVPAQRRPDDLWHLQGGARRHNELAVLLPGIAPKVLSERLEGLERRGLILRAPIAAFPRGVLYALSPAGKELVGILDRLELWSRQSMRRPQPE*