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SCNpilot_cont_300_bf_scaffold_1470

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1470_1
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..974
DNA (972bp) protein (324aa)
microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000368134E
ABC-type uncharacterized transport system, duplicated ATPase component {ECO:0000313|EMBL:EJL52082.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R
peptide ABC transporter
SCNpilot_cont_300_bf_scaffold_1470_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

986..1855
DNA (870bp) protein (290aa)
putative hydroxyacid dehydrogenase protein (EC:1.1.1.81)
2-hydroxyacid dehydrogenase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000379620D
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJL52081.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
SCNpilot_cont_300_bf_scaffold_1470_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2034..3338
DNA (1305bp) protein (435aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570,
Nicotinate phosphoribosyltransferase n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RY64_RHIET
SCNpilot_cont_300_bf_scaffold_1470_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3404..3859
DNA (456bp) protein (152aa)
Rrf2 family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B7770D
transcriptional regulator protein
Transcriptional regulator protein {ECO:0000313|EMBL:AJD42331.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
SCNpilot_cont_300_bf_scaffold_1470_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3860..4165)
DNA (306bp) protein (102aa)
Transcriptional regulator, Spx/MgsR family n=1 Tax=Rhizobium sp. AP16 RepID=J2LA29_9RHIZ
conserved hypothetical protein, ArsC related
Uncharacterized protein {ECO:0000313|EMBL:AHK43097.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="
SCNpilot_cont_300_bf_scaffold_1470_6
unknown

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comp(4188..4313)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1470_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4499..5122
DNA (624bp) protein (208aa)
heat shock protein Hsp90 n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035F438F
htpG; HSP90 family heat shock protein
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=106592 species=
SCNpilot_cont_300_bf_scaffold_1470_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5074..6324
DNA (1251bp) protein (417aa)
Chaperone protein HtpG n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X185_RHIFR
htpG; chaperone protein HtpG
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1185652 species
SCNpilot_cont_300_bf_scaffold_1470_9
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6416..6646)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PY61_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM74859.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_1470_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6974..9589
DNA (2616bp) protein (872aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SIA3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ24983.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1470_11
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9667..11205)
DNA (1539bp) protein (513aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
Histidine ammonia-lyase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H4W6_RHIRD rbh
hutH; histidine ammonia-lyase rbh
SCNpilot_cont_300_bf_scaffold_1470_12
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11401..12330)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JB26_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:GAJ96221.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1470_13
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12347..12784)
DNA (438bp) protein (146aa)
Transcriptional regulator, AsnC family n=169 Tax=Brucella RepID=B2SDC3_BRUA1
Transcriptional regulator, AsnC family
AsnC family transcriptional regulator {ECO:0000313|EMBL:EEX60261.1}; TaxID=520450 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortu
SCNpilot_cont_300_bf_scaffold_1470_14
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12900..13820
DNA (921bp) protein (307aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
Arginase family n=1 Tax=uncultured organism RepID=T1W9T8_9ZZZZ rbh
Arginase
SCNpilot_cont_300_bf_scaffold_1470_15
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13820..14884
DNA (1065bp) protein (355aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=2 Tax=Brucella RepID=D1D0Q8_9RHIZ
Ornithine cyclodeaminase {ECO:0000313|EMBL:EEY28270.1}; TaxID=520489 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis bv. 5 str. 513
SCNpilot_cont_300_bf_scaffold_1470_16
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14971..16302
DNA (1332bp) protein (444aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium sp. AP16 RepID=J2D899_9RHIZ rbh
D-amino acid oxidase {ECO:0000313|EMBL:KEA08621.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source=
D-amino acid oxidase
SCNpilot_cont_300_bf_scaffold_1470_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16304..16960
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035F75F5
chromosome segregation/condensation ScpB-like protein
Chromosome segregation/condensation ScpB-like protein {ECO:0000313|EMBL:AGS24364.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
SCNpilot_cont_300_bf_scaffold_1470_18
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17014..17619
DNA (606bp) protein (202aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:EUC01188.1}; EC=4.1.3.39 {ECO:0000313|EMBL:EUC01188.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiac
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Rhizobium sp. CF080 RepID=J2IHH8_9RHIZ
2-dehydro-3-deoxyglucarate aldolase
SCNpilot_cont_300_bf_scaffold_1470_19
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17777..19030
DNA (1254bp) protein (418aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Rhizobium sp. CF122 RepID=J3BMP8_9RHIZ rbh
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EJL53854.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizo
MFS permease rbh
SCNpilot_cont_300_bf_scaffold_1470_20
unknown

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comp(19039..19299)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1470_21
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19422..20051
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003711B9B
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAK72773.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1470_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20180..22144
DNA (1965bp) protein (655aa)
TfuA n=1 Tax=Rhizobium leguminosarum bv. trifolii RepID=Q52870_RHILT rbh
TfuA {ECO:0000313|EMBL:AAB17513.1}; TaxID=386 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminos
SARP family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_1470_23
unknown

Not on your lists

22366..22494
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1470_24
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22505..23461
DNA (957bp) protein (319aa)
YcaO-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5STZ0_RHIET rbh
YcaO-like protein
YcaO-like protein {ECO:0000313|EMBL:AGS25069.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rh
SCNpilot_cont_300_bf_scaffold_1470_25
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23458..23727
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2LET8_9RHIZ
UPF0142 protein
Uncharacterized protein {ECO:0000313|EMBL:EJJ31574.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_cont_300_bf_scaffold_1470_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23724..24467
DNA (744bp) protein (248aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q1Z7_RHIE6 rbh
hypothetical protein rbh
TfuA domain protein core {ECO:0000313|EMBL:ACS60201.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_1470_27
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24545..24814
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1TI19_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ31576.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1470_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24942..25346)
DNA (405bp) protein (135aa)
Transcriptional regulator, XRE family n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B6A477_RHILW
HTH family transcriptional regulator
Putative HTH family transcriptional regulator {ECO:0000313|EMBL:CAK03555.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
SCNpilot_cont_300_bf_scaffold_1470_29
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25651..26016)
DNA (366bp) protein (122aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003805271
LysR family transcriptional regulator
Putative transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:AFL53926.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/E
SCNpilot_cont_300_bf_scaffold_1470_30
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26173..26655
DNA (483bp) protein (161aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhizobium phaseoli RepID=UPI0002D96B5E
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EJZ19468.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
3-demethylubiquinone-9 3-methyltransferase
Displaying items 1-30 of 55 in total

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