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SCNpilot_cont_300_bf_scaffold_737_15

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(15614..15979)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JXU9_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 117.0
  • Bit_score: 191
  • Evalue 6.20e-46
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 117.0
  • Bit_score: 191
  • Evalue 1.70e-46
Transcriptional regulator {ECO:0000313|EMBL:ACM34979.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 117.0
  • Bit_score: 191
  • Evalue 8.60e-46

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGACGCCGTTCGGCGAAGCGGTGCGGGCGCTGCGGCAGCGCAAAGGCGTGTCGCAGAAGGAGATGGCGGCGGCCATCGGCGTTTCGCCGGCCTATCTCTCGGCGCTGGAGCATGGCCGGCGCGGCACGCCGACCTTCGACCTGCTGCAGAGGATCGCCGGCTATTTCAACATCATCTGGGACGAGGCCGAGGATCTGTTTGCGCTGGCCGGCTTTTCTGCGCCGCGCGTCAGCCTCGATACGTCAGGCCTGCCGGCCCAACACACGGCCTTCGCCAATCGTCTCGCGCGGATGATTCGCCAACTCGATCCCGACGTGATAGAGGAAATGGACAGGCTTCTGACGAAAGCCGCCAATACGCCGTGA
PROTEIN sequence
Length: 122
MTPFGEAVRALRQRKGVSQKEMAAAIGVSPAYLSALEHGRRGTPTFDLLQRIAGYFNIIWDEAEDLFALAGFSAPRVSLDTSGLPAQHTAFANRLARMIRQLDPDVIEEMDRLLTKAANTP*